Gene Apar_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1165 
Symbol 
ID8414038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1302427 
End bp1302897 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID645022754 
Productribosomal protein S7 
Protein accessionYP_003180184 
Protein GI257784967 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000269779 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000590673 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCGTC GCGCAGCAGC AGTACGTCGT GAGGTTATGC CTGACGCCGT CTACAACAAT 
CGTCTGGTAA CCCAGCTCAT TAACAAGGTC CTTCTCGACG GTAAGAAAGC AACCGCAGAG
CGTATTGTCT ACGGTGCATT TGACATCGTT GCAGAGAAGA CTGGCGAGGA TGCCCTCACT
GTCTTCAAGA AGGCTATGGA TAACATTCGC CCAACACTTG AGGTTAAGCC TAAGCGTGTT
GGTGGCGCTA CTTATCAGGT CCCAATGGAG GTTAACTCCC GCCGTGCAAC TACTCTTGCT
ATTCGCTGGA TGGTCACTTT CAGCCGTAGC CGTAAAGAGA AGACCATGGC AGAGCGTCTT
GCAAACGAGA TCATCGACGC AACTAATGGC GTAGGTGCAT CCGTCAAGCG CCGCGAGGAC
CTGTACAAGA TGGCTGAGGC CAACCGCGCC TTCTCCCACT ACCGCTTCTA G
 
Protein sequence
MPRRAAAVRR EVMPDAVYNN RLVTQLINKV LLDGKKATAE RIVYGAFDIV AEKTGEDALT 
VFKKAMDNIR PTLEVKPKRV GGATYQVPME VNSRRATTLA IRWMVTFSRS RKEKTMAERL
ANEIIDATNG VGASVKRRED LYKMAEANRA FSHYRF