| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1160 |
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| Symbol | |
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| ID | 8414033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1297672 |
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| End bp | 1298298 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645022749 |
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| Product | ribosomal protein L4/L1e |
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| Protein accession | YP_003180179 |
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| Protein GI | 257784962 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000738717 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000590673 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAAGT ATGAGATTAA GAACGTAGAG GGAAAGAAGG TCGGTACTAC CGAGCTTTCC
TCTGACGTCT ATGGCATTGA GCCAAACATC CCTGTTGTGC ATCAGGTTGT AGTCTGCCAG
GACGCATCCG CACGTCAGGG TACCCACTCT ACAAAGAACC GTCACGAGGT ATCCGGCGGT
GGCGTTAAGC CTTACCGTCA GAAGGGTACT GGTCGTGCTC GCCAGGGTTC TATTCGTGCT
GGTCAGTGGA CTGGTGGTGG CGTCATTTTT GGACCTACCC CTCGTTCCCA CGCACGTCGT
ATTAACAATA AGATGGTCAA GCTTGCTATG AGGTCCGTCC TCTCTGGCAA GGTTGCAGAC
TCCGAGCTTG TCCTCGTTGA CTCTCTTGAG TTTGCTCAGC CTTCCACCAA GCAGGCAAAG
GCTGCACTTC AGAACCTCGG TATTGAGGGT AAGCGCGTTA CCGTTATCGT TCCAGATGAT
GACGTCAACA CTTACCTTTC TTTCCGCAAC CTTCCTAAGG TTTCGATTTT CGGCGTTTCT
GAGGTTACTA CTCGTTTCCT GATTGACAAC GGCGCACTTG TTATGTCCGC TGATGTTGCT
AAGCAGCTTG GGGAGGTGCT CGCATAA
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| Protein sequence | MSKYEIKNVE GKKVGTTELS SDVYGIEPNI PVVHQVVVCQ DASARQGTHS TKNRHEVSGG
GVKPYRQKGT GRARQGSIRA GQWTGGGVIF GPTPRSHARR INNKMVKLAM RSVLSGKVAD
SELVLVDSLE FAQPSTKQAK AALQNLGIEG KRVTVIVPDD DVNTYLSFRN LPKVSIFGVS
EVTTRFLIDN GALVMSADVA KQLGEVLA
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