Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1159 |
Symbol | |
ID | 8414032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1297373 |
End bp | 1297672 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645022748 |
Product | Ribosomal protein L25/L23 |
Protein accession | YP_003180178 |
Protein GI | 257784961 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0089] Ribosomal protein L23 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000025981 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000476583 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACTCTC CTTATGAGGT CATCATTCGT CCTATCGTTT CAGAGCGTGC TTTCGATCTG ATGGAGCAGG GCAAGTACAC TTTTGAGGTT GCTCGTAACG CAGGTAAAGA AGAGATTGCT GCAGCTGTAG AGAAGCTCTT CTCTGTACAC GTCACCAAGG TAAACACACT TTCTGTTAAG CCAAAGAACA AGCGTGTACG TTATCAGCAG GCAGGTAAGA CTCGCCAGTG GAAGAAGGCT ATTGTTACCC TCGCTGCTGG TGAGACTATC GAAATCTTCG GTAATAAGTC TGCTGAGTAA
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Protein sequence | MNSPYEVIIR PIVSERAFDL MEQGKYTFEV ARNAGKEEIA AAVEKLFSVH VTKVNTLSVK PKNKRVRYQQ AGKTRQWKKA IVTLAAGETI EIFGNKSAE
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