Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1158 |
Symbol | |
ID | 8414031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1296398 |
End bp | 1297234 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645022747 |
Product | ribosomal protein L2 |
Protein accession | YP_003180177 |
Protein GI | 257784960 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000162145 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000663071 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGTTA GGCATTTAAA GCCAACAAGC GCAGGCAGGC GCTTCCAGAC AATCTCAGAC TTTGTTGAGA TTACAACTGA TAAGCCCGAG AAGTCCCTTC TCGAGCCCCT GCCAAAGAAG GCTGGCCGCA ACAACAATGG TCGCATCACT ACCCGTCACC AGGGTGGTGG CCACAAGCGC CAGTACCGTC GTATCGACTT CAAGCGTCGC AAGGATGACA TCCCAGCTAA AGTCGCTACC GTTGAGTACG ATCCTAACCG TTCCGCTCGT ATTGCTCTTC TGCACTATGC AGACGGTGCA AAGGCATACA TCCTTTGCCC AGAGGGCTTG AGCGTCGGTG ACACTGTTCT GTCTGGTACC AAGGACGTCG ATATCAAGCC TGGTAATTGC ACCACTCTTG AGCAGATTCC AGTAGGTACT CTTGTTCACG CAGTTGAGTT CCAGCCTGGT AAGGGTGCTG CAATGGCACG TGCTGCTGGT ACTTCCGTCC AGCTCATGGG TAAGGACAAC GGCTATGCAG TTCTGCGTAT GCCTTCCTCC GAGCTTCGTC GTGTTCTTCT GACCTGCCGT GCAACCATCG GTGAGGTTGG CAACGCTGAG CACTCCAACA TTGTTGTTGG TAAGGCTGGT CGTTCTCGCT GGGCAGGCGT TCGTCCTACC GTCCGTGGTA CTGTCATGAA CCCTGTTGAC CACCCACACG GTGGTGGTGA AGGTAAGAAC CACACTTCTG GTCGTCCTTC CGTCACCCCA TGGGGTAAGC CAACCAAGGG TTATAAGACC CGCGACCCGA AGAAGGCTTC TAACCGCCTG ATTATTCGCC GTCGTAAGTC CAAGTAA
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Protein sequence | MAVRHLKPTS AGRRFQTISD FVEITTDKPE KSLLEPLPKK AGRNNNGRIT TRHQGGGHKR QYRRIDFKRR KDDIPAKVAT VEYDPNRSAR IALLHYADGA KAYILCPEGL SVGDTVLSGT KDVDIKPGNC TTLEQIPVGT LVHAVEFQPG KGAAMARAAG TSVQLMGKDN GYAVLRMPSS ELRRVLLTCR ATIGEVGNAE HSNIVVGKAG RSRWAGVRPT VRGTVMNPVD HPHGGGEGKN HTSGRPSVTP WGKPTKGYKT RDPKKASNRL IIRRRKSK
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