| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1144 |
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| Symbol | |
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| ID | 8414017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1290099 |
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| End bp | 1290620 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645022733 |
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| Product | ribosomal protein S5 |
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| Protein accession | YP_003180163 |
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| Protein GI | 257784946 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000788101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0120151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTG ATCGTAAGCG CCAGCAGGAT ACGGATCTTC AGGAGCGCGT CGTTTATATT
CACCGCGTTT CCAAGACCGT TAAGGGTGGC CGCCGTATGT CACTCGTTGC TCTGGTAGTT
GTTGGCGACG GTAAGGGTAA CGTTGGTATT GGCCAGGGTC GTTCCGCTGA GGTACCTCTG
GCAATTCAGA AGGGCGTCGA GGACGCAAAG AGGAACATGT TTAAGGTTCC ATTGACCGAG
ACTGGTTCCG TACCACATGC AGTTACTGGT CGCTATGGTG CAGGTTCTGT TCTTATTAAG
CCTGCATTCG AGGGTACTGG TGTTATTGCT GGCGGTCCTA TTCGTCCACT CTTCGAGCTT
GCAGGTATCA CCAATGTACT TTCTAAGTCT CTTGGTACCG ACAACGCTCT GAACATGATT
AAGGCAGCAG CTGAGGGTCT GAAGGAGCTT TCCAGCCCAG AAGAAGCAGC TGAGCGTCGT
GGTCTAACCG TCGGCGATAT GTTCGTCGGA AAGGAGAACT AA
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| Protein sequence | MARDRKRQQD TDLQERVVYI HRVSKTVKGG RRMSLVALVV VGDGKGNVGI GQGRSAEVPL
AIQKGVEDAK RNMFKVPLTE TGSVPHAVTG RYGAGSVLIK PAFEGTGVIA GGPIRPLFEL
AGITNVLSKS LGTDNALNMI KAAAEGLKEL SSPEEAAERR GLTVGDMFVG KEN
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