Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1140 |
Symbol | |
ID | 8414013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1287479 |
End bp | 1288105 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645022729 |
Product | adenylate kinase |
Protein accession | YP_003180159 |
Protein GI | 257784942 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0563] Adenylate kinase and related kinases |
TIGRFAM ID | [TIGR01351] adenylate kinases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000592914 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.025222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATTG TTCTTCTCGG CGCACCTGGC GCTGGCAAGG GTACACAGGC TCAGAAGCTC GTTGCAGAGT ATGGACTTGC TCACATCTCA ACCGGTGACC TTCTTCGTGC TGCTGTTAAA GCTCAATCAG AGCTTGGTAT TAAGGCTAAA GAGTATATGG ATGCTGGTCA GCTTGTTCCA GATCAGCTTG TAATTGATTT GGTTAAAGAG CGCCTTTCTG CAGACGATGC AAAGGCTGGT TTTATTCTTG ATGGTTTTCC ACGCAATACT GCTCAGGCAG TAACCCTTGA TTTTGAGCTT CAGAATATGG GCCTCAAGCT TGATGCAGCT TTGCTTGTTG CTGTTGAGCC AGAAGTTATT GTTGAACGTC TTTCTTCTCG TCGTACCTGC AAAGAGTGTG GTTATACTGC GCCCGCTGGT ACTGAGATTT GCCCAAATTG TTCTGGTGAG ATGTATCAAC GCGATGACGA TAAGCCAGAA ACTATTCGTA AACGCCTTGA TGTTTACAAG AATCAGACTT CTCCTTTGAT TGAGTACTAT AAAGGACATG GAATTCTGAA GGAGGTCAAC GGAGATCGTC CTGTTGACGA GGTATTCGCC GACGTAAAGA CGCTCCTCTC ACTATGA
|
Protein sequence | MNIVLLGAPG AGKGTQAQKL VAEYGLAHIS TGDLLRAAVK AQSELGIKAK EYMDAGQLVP DQLVIDLVKE RLSADDAKAG FILDGFPRNT AQAVTLDFEL QNMGLKLDAA LLVAVEPEVI VERLSSRRTC KECGYTAPAG TEICPNCSGE MYQRDDDKPE TIRKRLDVYK NQTSPLIEYY KGHGILKEVN GDRPVDEVFA DVKTLLSL
|
| |