| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1139 |
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| Symbol | |
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| ID | 8414012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1286694 |
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| End bp | 1287482 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022728 |
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| Product | methionine aminopeptidase, type I |
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| Protein accession | YP_003180158 |
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| Protein GI | 257784941 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0024] Methionine aminopeptidase |
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| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000863177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0264901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACAA TAAAAACACC TGAACAAATC GAGGCTATGA AGGTGTCGGG TGCTCTTTCT
AAGGCAGCTC TTCGCCGTGC TGGATCCATG ATTAGACCTG GTGTTTCAAC GCTCGAAATT
GACCGCGCTG TCGAAGCTTT TATTAAACTT CATGGCGGAA CACCTACTTT TAAAGGTTAT
GGCGGATTTC CTGGATCTGT TTGTTCTTCT ATTAATGAAC AGATTGTTCA CGGTATTCCA
TCAGCTAACG TCATTTTGCA AGATGGCGAT ATTCTGACCA TTGATACTGG TGCTACCGTT
AACGGTTGGG CGGGAGATAA CGCTTGGACG TTCTACTGTG GAACAGTTGA CGAGAAAACC
CAGGCACTTT GTGAGGTTAC ACGCGATTGC CTTAAAGCAG GTATTGCAGC TGCTGTTCCA
GGCGCTCGCC TTGGTGATGT AGGACATGCA GTCCAAAAGC TTGCAGAAGA TAATGGCTAT
GGCGTCATTC GTGATTTTGT TGGTCATGGT ATTGGTCGTA ATCTTCATGA GGATCCAGAG
GTCAGAAACT ATGGCCGTGC AGGTAATGGA ATTGTTCTTC GTGAGGGAAT GGTAATTGCA
ATTGAGCCAA TGATTGCCAT GGGTACTTAC GATTGTACTG TTCTTGAAAA TGGTTGGACC
GTTGTCACTG ACGATGGCTT GCCATCTGCG CATTATGAGA ACACTGTTGC TATTACTGCC
GATGGACCTG TTATCGTCTC AGAGGACGAG GTCGGTCCAT GGTGTGAGAT GCAAGGTGGA
CTTGAGTAA
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| Protein sequence | MITIKTPEQI EAMKVSGALS KAALRRAGSM IRPGVSTLEI DRAVEAFIKL HGGTPTFKGY
GGFPGSVCSS INEQIVHGIP SANVILQDGD ILTIDTGATV NGWAGDNAWT FYCGTVDEKT
QALCEVTRDC LKAGIAAAVP GARLGDVGHA VQKLAEDNGY GVIRDFVGHG IGRNLHEDPE
VRNYGRAGNG IVLREGMVIA IEPMIAMGTY DCTVLENGWT VVTDDGLPSA HYENTVAITA
DGPVIVSEDE VGPWCEMQGG LE
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