Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1124 |
Symbol | |
ID | 8413997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1272582 |
End bp | 1274804 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645022713 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_003180143 |
Protein GI | 257784926 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTA TCAAGCGCAA TGGCTCAGAG GTCACCTTCG AGGTTGAGAA GATTGTTAAC GCAATCGCTA AGGCTAACGC AGAGGTCCCT GAGGATCAGC GCCTGACTGA GCGTGAGATT CAGTTTGCTT CCCTTAACGT TACCGATGAG TGTGAGAAGG CTGGACACAC CGTTACCGTC GAGGAGGTCC AGGACCTTGT CGAGGATCAG CTCATGGCTC TTGACCGCTT TGAGGTTGCT CGTAAGTACA TCATTTACCG CTACATCCAG AACCAGAAGC GTCACAAGAA CACCACCGAT GACAAGATTC TGTCTCTGAT TGAGTGCAAC AACGAGGAAG TCAAGCAGGA GAACTCCAAC AAGAACCCTA CCGTTGTTTC CGTTCAGCGT GACTACATGG CTGGTGAGGT TTCTAAGGAC CTCGTTCAGC GTGAGCTCCT TCCAGAGGAT ATTGTTGCTG CTCACAACGA GGGTCTTATC CACTTCCACG ATTCCGATTA CTTTGCACAG CACATGCACA ACTGTGACCT CATTAACCTT GATGACATGC TGCAGAACGG TACTGTTATC TCTGGCACTC TGATTGAGCG TCCACATAGC TTCTCTACTG CATGCAACAT TGCAACTCAA ATCATTGCTC AGGTAGCATC CTGTCAGTAC GGTGGTCAGT CCATCTCCTT GGCTCACCTT GCTCCTTTTG TTGATGTTTC TCGTAAGAAG ATTCGCAAGA CCGTTATGGA GGAGATGAAC TCCGTCGGTG TTGAGCTTTC TGCTGAACAG CTCAACGAGA TGGTTGAGAA GCGCCTTCGT GACGAGGTTT CTCGTGGCGT TCAGACCATT CAGTACCAGG TTGTCACCCT TATGACCACC AACGGCCAGG CTCCTTTTAT TACCGTCTTC ATGTATCTCA ACGAGGCAAA GAATGATCAG GAGAAGAAGG ACCTTGCACT CATCATTGAA GAGATGCTTC GTCAGCGTTA TCAGGGCGTA AAGAATGAGG AGGGTGTCTG GATTACTCCT GCATTCCCTA AGCTCATCTA TGTTCTTGAA GAGGACAACG TTTACGAGGA TTCTAAGTAC TACTACCTCA CTCAGATGGC TGCAAAGTGC ACCGCTCGCC GTCTTGTCCC TGACTACATC TCTGAGAAGA AGATGAAGGA GTACAAGCTT TCTAAGGGCG AGAAGGAAGG CGAGGGCGAT ACCTTCACTT GCATGGGTTG CCGTTCCTTC CTGACTCCAG ACCGCTCTGG TAATGGTTTC AACAATGTTG CTCGTGCAAA GAACTATGAG CCAGGTAAGC CTAAGTACTA CGGTCGTTTC AATCAGGGTG TTGTAACCAT TAACCTTCCT GACGTTGCTC TTTCTGCTGG CCGTGATATG GACAAGTTCT GGAAGATCTT CGATGAGCGT CTTGAACTTT GCCACCGCGC ACTTCGCGCT CGTCATGATC GTCTGAAGGG CACTTTGTCT GACGCCGCAC CTATCCTTTG GCAGTACGGT GCACTTGCTC GTTTAGATAA GGGTGAGGTT ATTGATCCTT TGCTTTACGG CGGATATTCC ACCATCTCCC TTGGTTATGC AGGCCTGTAC GAGTGCGTTA AGGCTATGAC TGGTCACAGC CACACCGACA AAGAGGCAAC TCCATTTGCA CTTCAGGTTA TGCAGCACAT GAACGATAAG TGCACTGAGT GGAAGGAAGC AGAGGATATC GATTACTCCC TTTACGGAAC TCCTCTTGAG TCCACCACCT ACAAGTTTGC TAAGGCACTT CAGCGTCGCT TTGGTGTTAT CCCTGGCATT ACTGATAAGG GCTACATCAC CAACAGCTAC CACGTCCACG TTGCAGAAGA GATTGACGCA TTCCAGAAGC TTCAGTTTGA GTCTGAGTTC CAGCGTCTTT CCCCAGGTGG AGCAATCTCT TACGTTGAGG TTCCTAATAT GCAGGATAAC ATCGAGGCTG TTCTTAGTGT CATGCAGTTC ATCTATGAAC ACATCATGTA TGCAGAGCTT AACACCAAGT CTGACTTCTG CCAGGAGTGT GGTTATGACG GTGAGATTCA GATTGTTGAG GAGGATGGCA AACTGGTTTG GGAGTGCCCA CACTGTGGTA ACCGTGACCA GACCAAGATG AATGTTGCTC GTCGTACCTG CGGCTACATT GGCACCCAGT TCTGGAACCA GGGCCGTACC CAGGAGATCA AGGATCGCGT CCTTCACCTC TAA
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Protein sequence | MKIIKRNGSE VTFEVEKIVN AIAKANAEVP EDQRLTEREI QFASLNVTDE CEKAGHTVTV EEVQDLVEDQ LMALDRFEVA RKYIIYRYIQ NQKRHKNTTD DKILSLIECN NEEVKQENSN KNPTVVSVQR DYMAGEVSKD LVQRELLPED IVAAHNEGLI HFHDSDYFAQ HMHNCDLINL DDMLQNGTVI SGTLIERPHS FSTACNIATQ IIAQVASCQY GGQSISLAHL APFVDVSRKK IRKTVMEEMN SVGVELSAEQ LNEMVEKRLR DEVSRGVQTI QYQVVTLMTT NGQAPFITVF MYLNEAKNDQ EKKDLALIIE EMLRQRYQGV KNEEGVWITP AFPKLIYVLE EDNVYEDSKY YYLTQMAAKC TARRLVPDYI SEKKMKEYKL SKGEKEGEGD TFTCMGCRSF LTPDRSGNGF NNVARAKNYE PGKPKYYGRF NQGVVTINLP DVALSAGRDM DKFWKIFDER LELCHRALRA RHDRLKGTLS DAAPILWQYG ALARLDKGEV IDPLLYGGYS TISLGYAGLY ECVKAMTGHS HTDKEATPFA LQVMQHMNDK CTEWKEAEDI DYSLYGTPLE STTYKFAKAL QRRFGVIPGI TDKGYITNSY HVHVAEEIDA FQKLQFESEF QRLSPGGAIS YVEVPNMQDN IEAVLSVMQF IYEHIMYAEL NTKSDFCQEC GYDGEIQIVE EDGKLVWECP HCGNRDQTKM NVARRTCGYI GTQFWNQGRT QEIKDRVLHL
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