Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1123 |
Symbol | |
ID | 8413996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1271926 |
End bp | 1272468 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645022712 |
Product | anaerobic ribonucleoside-triphosphate reductase activating protein |
Protein accession | YP_003180142 |
Protein GI | 257784925 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | [TIGR02491] anaerobic ribonucleoside-triphosphate reductase activating protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTATT CAAATATTAA GTTTTCAGAC ATTGCAAATG GTGTTGGTGT AAGAACAACT TTGTTTGTTT CAGGTTGCCG CCTGCACTGT GAGGGCTGCT TTAACTACGA GGCATGGGAC TTCAAGAGTG GTGGAGAGTT TACCCCAGAA GTAGAGCAAG AAATTATTGA TTCACTTGCG CCTGTCTATA TTAATGGTCT TTCTATTCTT GGTGGAGAGC CCTTTGAGCC AGAAAACCAA GAAGGTCTTG TTGAATTTGT CGAGAAGGTC AGAGCTACCT ATCCACAAAA GAGTATCTGG ATGTATTCAG GACACACCTG GGATCAGTTG ACTGAGGGAA AGTGGCATAC AGAGTACACT GATCGCATTC TATCTTGTAT AGACGTTTTG GTAGATGGTC CGTGGATTCA GAGTCTCCAC GACATTACCT TGCGTTTTAG AGGTTCTTCT AATCAACGTC TTATTGATGT CCCTAAAACA CTCGCTTCAG GAGAGATTAC GCTTTGGTCC GATGGACCTA TGATGAGCTC TCGTGAGATG TAA
|
Protein sequence | MNYSNIKFSD IANGVGVRTT LFVSGCRLHC EGCFNYEAWD FKSGGEFTPE VEQEIIDSLA PVYINGLSIL GGEPFEPENQ EGLVEFVEKV RATYPQKSIW MYSGHTWDQL TEGKWHTEYT DRILSCIDVL VDGPWIQSLH DITLRFRGSS NQRLIDVPKT LASGEITLWS DGPMMSSREM
|
| |