Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1041 |
Symbol | |
ID | 8413914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1176037 |
End bp | 1177770 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645022630 |
Product | ABC transporter related |
Protein accession | YP_003180060 |
Protein GI | 257784843 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATCTG TCTTAAAAAT GTACTTTCAG TTTGGAAGCT CTTATCGCCA GAAACTCTAC AAAGGTCTTT TCTTTACCAT TCTTGGTTGC CTTTTTGAAG GCGTACAAAT AACGGCGCTT TGGATCGTTT TTACCGCTCT TACTACTAAC ACACTCTCAA CCCAGACGAT ATTTTCTGCA CTGGGAGTAA TGCTTTTAAG CATTATGGGG ACGTTCGTTT GCGCTCACTT TAAGAGTGAG AATTTCTGTG ATGCTAATTT CAGTATGGCT GGTGCAAAGC GTGCAGAAAT TGGAGATACA TTACGTCGCC TTCCTATGGG TTATTTTAAC GAGAATAGCC TTGGAGAAGT AACAGCTGTT ATGACTAATC AGCTTGACGT AATGCAAAAT CTTGGTGGTC TGCTTTATAT GATGGTTGTT GGAGGTTTGG CTTTAACAGC AATTATTGTT GCATTCTTGT TCGTGTTCTG TTGGCAATTA GGTCTTATAA CTGCAGCTAC TTTTGTTTTC TTCTGTATAA CAATGGAGCT GCTTCAGGCT TACGTACGTA ATACATCAGA TGATTATGTG GCTGCCAACA CTACCTTGAT CAGCTCCGTA CTTGAGTATG TCCGTGGCAT TAATGTGGTA AGGTCATTTT CTCTTATTGA CGATGCTGAG GGAAAATATG CCAAAGCTGT TGATGATTGT CGTGTTCAAG CACTCAAACT TGAATTTAAG GCACTTCGTT TCTCAGTTCT GCAAATGGTT GTTTCTAAGG CTACCAGCGT TATTATGTGC TTGGTATCAG TTGAATTATG GCTATCGGGA ACACTTGATA CAGCTTCTTG TTTGACGGTA GTAGTTATGT CATTTATGTT GTTTAGTCGC TTAGAATCAG CTGGTCGTTT CTCAACTATT TTACGCAACC TTGAAATTGC AATGGAGCAA ACAAATGCTA TTCTCGCTAC TCCTGCAATG GAGGAGGGAG AAGGTCTTGA GGAAGCGGCA TCCTGTGACA TAGAGCTTTC TCATGTGTCG TTTGGCTACG ACGATAGGCA AATTCTCGAA GATGTAAGCC TTTCTATTCC TGCGGGTACT TCTTGCGCAA TTGTAGGACC AAGTGGATCT GGCAAAACAA CGCTTGTCCG TCTTATTGAG CGTTTTTGGG ATGTGAATAC AGGACAAGTG TCACTTGGTG GACACGATGT ACGCGACTAT AAGGTTGATG CTCTTCTTCA AAATTTCTCT ACCGTTTTTC AGGGAGTATT TCTTTTTGAT GACACTATTG AGAACAACAT TAAGTTTGGT AATCCAAGTG CAACTCATGA GCAAGTAGTC GATGCAGCTA GGCGCGCCTG TTGTGAGGAG TTTATCCAGG CATTACCTAA TGGATATGAA ACACGCTTAG GTGAAGGTGG TTCAATGCTT TCTGGTGGCG AGCGCCAGCG TCTTTCTATT GCGCGTGCCA TCTTAAAAGA TGCACCGATT GTTGTACTTG ATGAGGCTAC GGCTAATGTT GATCCGGAAA ATGAACTTGA GTTGCAGCAT GCAATTGCAG AGCTCACAAA GTCAAAGACT GTCATTATGA TTGCTCATCG CTTAAAGACA GTTCGCAATG CAGATCAGAT ACTTGTGTTA GATAAAGGTC GTATTGTGCA AAGAGGCACT CACGAATCTC TCATGGCAGA GGGCGGTATT TACGCTGATT TTGTTAACAT GCGCGAGAAA ACCGTTGGCT GGAAAATTGC ATAG
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Protein sequence | MLSVLKMYFQ FGSSYRQKLY KGLFFTILGC LFEGVQITAL WIVFTALTTN TLSTQTIFSA LGVMLLSIMG TFVCAHFKSE NFCDANFSMA GAKRAEIGDT LRRLPMGYFN ENSLGEVTAV MTNQLDVMQN LGGLLYMMVV GGLALTAIIV AFLFVFCWQL GLITAATFVF FCITMELLQA YVRNTSDDYV AANTTLISSV LEYVRGINVV RSFSLIDDAE GKYAKAVDDC RVQALKLEFK ALRFSVLQMV VSKATSVIMC LVSVELWLSG TLDTASCLTV VVMSFMLFSR LESAGRFSTI LRNLEIAMEQ TNAILATPAM EEGEGLEEAA SCDIELSHVS FGYDDRQILE DVSLSIPAGT SCAIVGPSGS GKTTLVRLIE RFWDVNTGQV SLGGHDVRDY KVDALLQNFS TVFQGVFLFD DTIENNIKFG NPSATHEQVV DAARRACCEE FIQALPNGYE TRLGEGGSML SGGERQRLSI ARAILKDAPI VVLDEATANV DPENELELQH AIAELTKSKT VIMIAHRLKT VRNADQILVL DKGRIVQRGT HESLMAEGGI YADFVNMREK TVGWKIA
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