| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0983 |
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| Symbol | |
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| ID | 8413855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1110227 |
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| End bp | 1110817 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022572 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_003180003 |
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| Protein GI | 257784786 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGACA TCAAGATTTC GGGACGCAAG GTAAGTATTT CTGAGGCTTT GCGCGCACAC
GTAGACCAGA AAATTGGTGA TGCTCTTAAG GTATTTGACA TCACTCCTAT GTCTTGCGAT
GTTGTTCTCA GAGTAGACAA AAACCCTTCA AATCCAGATA GAAAGACAAC TGAGGTTACA
GTATTTGTCC GTAACAATGT TGTTCGTGTC ACCGCTAGTT CTGACGATAT GTATGCAGCT
ATTGATGAAG CAGCGGACAA AGTCTCCAGA CAGTTACGTA AGTACAAGAC AAAGGTTGTT
GAGCGCCGTC ATCACATGAA GTCTGAGCGC GGTATTGCTC TTACACAAGA AGATCTTGCT
AATCTTATTG AGATCCCAGC TGAAGACCTT GATGACCAGC TTGTTCGCGA GAAATACGTT
GATCTTGAAC CAATGACAGA AGAGGAGGCG CTTGTCCAAA CTGATCTTCT CGGTCATGAT
TTTTATGTCT TTGTTAATTC TTCAACGGGT TTGACTAATG TCATTTACCA TCGTAAAAAT
GGTGGTTATG GAATTATTAA ACCCAAGATT GAGGAACCAG ATGTTCAATA A
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| Protein sequence | MVDIKISGRK VSISEALRAH VDQKIGDALK VFDITPMSCD VVLRVDKNPS NPDRKTTEVT
VFVRNNVVRV TASSDDMYAA IDEAADKVSR QLRKYKTKVV ERRHHMKSER GIALTQEDLA
NLIEIPAEDL DDQLVREKYV DLEPMTEEEA LVQTDLLGHD FYVFVNSSTG LTNVIYHRKN
GGYGIIKPKI EEPDVQ
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