Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0981 |
Symbol | |
ID | 8413853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1108069 |
End bp | 1109133 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645022570 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_003180001 |
Protein GI | 257784784 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACTGA GCAAAAATGC AAAGGTTGCT TTTATTGGAA CAGGTATTAT GGGCGCTCCT ATTGCAGAGC ACCTTATTTC TGCTGGTTAT GACGTTACTG TTTATAACAG AACACCAGAA AAAGTCCAAA GGCTTGTCTC TTTGGGTGCT CATGCTGCGG AGAGCGTAAC AGATGCCGTA AAAGATGCTG ACGTTGTCTT TACCATGGTT GGTTATCCAA CTGATGTTGA AGACGTTTAT TTAACAACAG ATGGTCTTAT TCGCGTTGCT AAGAAAGGTG CATACCTTAT TGACCTCACC ACTTCTTCAT CTCAGCTTGC GCGTGATATT CACGATGCTG CTGAGATTGA GGGAAAACAT GCGTTTGACT GCCCCGTTAC TGGAGGTCAG AAGGGAGCTC AAGACGGTAC TCTTACGTTG ATTATTGGTG CAACTGAGAA TGACATTGAG CCAGTTCGCG CACTTCTCGA GACCTTCTCA TCAAAGATTT TCTGTATGGG CGGTGCTGGT AAGGGTCAGA CTGCAAAGCT CTGTAATCAG GTATCTCTTG CTTCCTGCAT GATTGGCTAT GCTGACGCAA TGGCTTTGGC AGAGCAGGGC GGACTTGATG TTGAGCAAAT GCTTGAGGTT GTTGCAAGTG GCATGGGTTC TTCTCGTGCA CTTAAAGAGC TTGCTCCTAA ATCGCTTGAG GGAGATTTCC AGCCAGGATT TTTGGCTGAG CACTTCCGCA AGGATATTGC GCTTGCTCTT GCTCAGTCTG AGGATCTTGA GATTACGCTT CCTGGTGCAG AGACTGCATT TACTTTGTAT GACATGCTGT GTCAGATTGG TGGTGCTCGT AAGGGTACTC AGGCAATCTC GTTGCTTTAT GCTGATGAGG CAACTAGTAC TGCAGCTGGC CTTGATTGGT CACTTCTTGA GGACCAGGAA GATGAGGGTG AACACGAATG CTGCTGCGGT CACGATCATG AAGATGGCAA TCACGAGTGC GAGTGCCACG GCCACGGACA TCATCATGAC CACGAAGGTC ATGAGCACGG CCATGATGAA CACTGTTGTC ATTAG
|
Protein sequence | MALSKNAKVA FIGTGIMGAP IAEHLISAGY DVTVYNRTPE KVQRLVSLGA HAAESVTDAV KDADVVFTMV GYPTDVEDVY LTTDGLIRVA KKGAYLIDLT TSSSQLARDI HDAAEIEGKH AFDCPVTGGQ KGAQDGTLTL IIGATENDIE PVRALLETFS SKIFCMGGAG KGQTAKLCNQ VSLASCMIGY ADAMALAEQG GLDVEQMLEV VASGMGSSRA LKELAPKSLE GDFQPGFLAE HFRKDIALAL AQSEDLEITL PGAETAFTLY DMLCQIGGAR KGTQAISLLY ADEATSTAAG LDWSLLEDQE DEGEHECCCG HDHEDGNHEC ECHGHGHHHD HEGHEHGHDE HCCH
|
| |