| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0894 |
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| Symbol | |
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| ID | 8413760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 999463 |
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| End bp | 1000095 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022477 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_003179914 |
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| Protein GI | 257784697 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00161936 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.093504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCC AGCTTACGGG CACACTTGTA TCCGTTACTC CTTCAGTCGC TGTTCTCGAT
GTTAATGGTG TTGGGTATGA GCTAGGTATA TCAGCCTCAA CAGCTGCTGC GCTTCCACAA
GCGGGCGAGG CGGGCGTTAC GGTTTTAACG CGTATGGTTG TTAGAGAAGA CTCAATGGAA
CTCTTTGGTT TTGCTTCGCG AGAAGAGCGT GCACTCTTTG ATCGCTTACG TGCAATTTCT
GGAGTTGGTC CTAAACTAGC TCTTTCTGTT CTTTCTACGT TTACTCCGCA GCAGCTTGCA
GTAATTGTGG CTACTAACGA TGGTAATCGC CTTAAGAGTG TCTCTGGTCT TGGTAAGAAA
AAAGCAGAAC GCTTGATTAT TGAACTATCT GATGTGTTTG CAAAAGATAC AGAGCTTAAA
CAGCTTGTTG GACTTACCTC TCCTACAGAT TTTGCTTCTA TTCCAAAACC TACTGTAACT
TCAGTAGAAT CAGAGGCTAT TGAGGCTCTC CTTGGAATGG GCTTTACTTC TCAGGAGGCA
ACGCTTGCTC TTGAGGGTTA TGAAGAGGTT GGTGCTATTA CAATTGAAGC TGCTATTGGA
TATGCATTAA GGCGTTTGGG AAGTGGTAAT TAA
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| Protein sequence | MIVQLTGTLV SVTPSVAVLD VNGVGYELGI SASTAAALPQ AGEAGVTVLT RMVVREDSME
LFGFASREER ALFDRLRAIS GVGPKLALSV LSTFTPQQLA VIVATNDGNR LKSVSGLGKK
KAERLIIELS DVFAKDTELK QLVGLTSPTD FASIPKPTVT SVESEAIEAL LGMGFTSQEA
TLALEGYEEV GAITIEAAIG YALRRLGSGN
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