Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0887 |
Symbol | |
ID | 8413753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 989169 |
End bp | 991436 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645022470 |
Product | hypothetical protein |
Protein accession | YP_003179907 |
Protein GI | 257784690 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.069318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGTC AGGAAAATAA TCCAGAAGCT AAACAACCTG GAAGAAACAG GCTTGGAAAA CTCTATCCGT CTCTCGTCAA TGAAGACGTT CTGCCTGATG AGTCTCTAGA CGCTGCTCAA AATAATCAAC ATGTTGGTTC TATTGACCAA ACTGGTTGGC ATACAAAACT AAATATTGAA GCGCTTTCTC TTACTCTTAC GGAATCCACT TCTCCACTTG AAGTACTTAA ACATTTTGTA AATACAGCAT TTTTGCGTGA AAAAGATTCA CACCGAAAAG GTGGTTCTGT TGCCATTCCG CCAAGTGATT TTGAACTTCA TCTAGCTCAA AGACTAAAAG ATGCTGGTGT CCTTGAAGTG TGTGGCATTA CCGTCCCCTG CCGTGTTGTG CGTCTGCGCA CCAATGGTCT TTTTTATCTG CGTGCTAATC AAAAAGCACT TTCCTACAAG CAGAAAATTC AGCTTCTTAC TATTGAAAGC GCATTAAACA CTGCCCTTTT TGCAGAGCGA TATTTTCTTG ATGCAAATAT GGCATCTGAA CATGACTTAC TTGCCTTTGA ACAAAAGATT GTTTCTACCA TGATGAAACA ATCTAGGTCG CGCTGCGCCA CAACCCAAAG CACTCAAGAA GATGGCGAGT GGGTTGTCCG CAAAGCCATT TCCCTACACA TTGAGAGCCT GCGTCTATCT CAGCGTCTTA TCACTGAGTT TAGAACCAAC GTACACAAGG GCATTGCTGC CTTTAGAGTA CATCTAGCGC TTCCTGAACA ATTTCCAAGA AGCTTTCTTT ATGCAGATGG AAGCATCAAA GAAGCCAACT TTGATGACCT TTGTCGTGCA GCCACTGCTT ACAACATGCA CCTTGGCATG CTCATTACCG CAAGTGCCTT TAGAAGCTCC CTGAAGATCA ATGAGGTCTG GCTTTCTGGC ATTTGCGACA CAGACAAACT GCATGCATGT CTTTTCTCGT TCCACATTAC ACGCAAGCAA TTTGAAGATA CGAACATTAC TGAAGAGACT GATTCACTTT CTATCTACAA GCTATGGAAC GCACGAATTG ACGAGGTAGA CGGGATTCTT CATGCAGTAC AACCTCTCTT TACCTTAAAC AATGAGATTT TCTGTCCACC AAGTAGATAC GATTTTGTTG AGTCTTCACA AAAACGACTT GATAGCGTCG CAGCTCACGC ACTAGGCACT GATGAGGTGT CAGGACTGTC TATTGATGAA GGTCAAGCGC GAGAAGAGAT TATCACCAAA ATTCTGCGTA ACCTCTCTTC TTCCACAGAA GAAAACGTCC GCACCATATT GTCGTATACC GCAAACTCCA CCGATCTTAC GGTGCGAGCA GCAGGAGAAC GCGTGGTTTC TCGCTTTATT AAGGGTACCC TCGCAGAAGA TGATTTTGAG GCCATTTACG AAGAATTTGT TGATGGTGGT GTTCTTTCCT TAGCGGTTAC CAAAGCTCAG CGTCTCATTG GCGAGAAAAA CTATCAAGAC GCAGAGCTAC TCCTGCTTGA AGCACTTGAC TCCGTTGACG GAAATAATAC ATACACGGAT ACAAGCACTA CGCAGTGGCG CGTGTTTATG AACTACGTCG ATCGCGTACT CTATAACAGA ATTCTCTCTA ACCCAGAAAA AAATACTCGC CTGGCTCCTA TGTCCTACTT TGAAGCGCAC CTTCTAGTTT CTATTGCACA AGCGCTCCAA GGACAAATTC AGAATGCTCT TCGGCACGCA AGAAGAGCTG TTGAGATTGC GCCACTAAGC ATGAGTGCTA GGCTACACCT CTCCCACTGC CTTGAAGAGT CACTGGATAT TAATGCTGCA GCAGATGAGC TAAAGAGGCT TCTGTTGCTT GCACATGACC CTGAGAGCAT TGGATTTGGC TATTATCGTA TGGCATTCTT CCAATGGAGG CTCAGACACC TGAAAGCCGC ACAAGCTTGT TATCAGTTTG CCTTGAAGTT TTTGCCAGGT GCTACGTTCA TCATTGGCAC AGAAACAGCA ATTCTCTCGC AAACTGAGCC TGAGTTTAGT TGTGACGATA TGAGCGACGA AGAAATCTAT TCCACACTGA TGCAAGAGCA AATTCCTATC GCGCCAACCA ACGAAGTCTC TACTATTTTC TTAGATGGTA CACGTGCCTC ACTTGATGCA GAACTCTTTA GTGTTGCTAA GAACTTCATT ATGAACCTGG GCATTATGAC TAAAGACGAT ATCTACTTTG ACATGCTCAA CTCCATTGAA GGAGAGCCTG ATAGATAA
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Protein sequence | MTRQENNPEA KQPGRNRLGK LYPSLVNEDV LPDESLDAAQ NNQHVGSIDQ TGWHTKLNIE ALSLTLTEST SPLEVLKHFV NTAFLREKDS HRKGGSVAIP PSDFELHLAQ RLKDAGVLEV CGITVPCRVV RLRTNGLFYL RANQKALSYK QKIQLLTIES ALNTALFAER YFLDANMASE HDLLAFEQKI VSTMMKQSRS RCATTQSTQE DGEWVVRKAI SLHIESLRLS QRLITEFRTN VHKGIAAFRV HLALPEQFPR SFLYADGSIK EANFDDLCRA ATAYNMHLGM LITASAFRSS LKINEVWLSG ICDTDKLHAC LFSFHITRKQ FEDTNITEET DSLSIYKLWN ARIDEVDGIL HAVQPLFTLN NEIFCPPSRY DFVESSQKRL DSVAAHALGT DEVSGLSIDE GQAREEIITK ILRNLSSSTE ENVRTILSYT ANSTDLTVRA AGERVVSRFI KGTLAEDDFE AIYEEFVDGG VLSLAVTKAQ RLIGEKNYQD AELLLLEALD SVDGNNTYTD TSTTQWRVFM NYVDRVLYNR ILSNPEKNTR LAPMSYFEAH LLVSIAQALQ GQIQNALRHA RRAVEIAPLS MSARLHLSHC LEESLDINAA ADELKRLLLL AHDPESIGFG YYRMAFFQWR LRHLKAAQAC YQFALKFLPG ATFIIGTETA ILSQTEPEFS CDDMSDEEIY STLMQEQIPI APTNEVSTIF LDGTRASLDA ELFSVAKNFI MNLGIMTKDD IYFDMLNSIE GEPDR
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