| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0869 |
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| Symbol | |
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| ID | 8413735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 963427 |
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| End bp | 965739 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022452 |
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| Product | primosomal protein N' |
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| Protein accession | YP_003179889 |
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| Protein GI | 257784672 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.162124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTTTG CACATGTTGT TTTAGACATA CCAACTCGTG CTCTCTCTGG CACGTTTGAC
TACGCTATTC CAAGTTCTTT GGAAGAGACT GCGGTTGTGG GAACAACGGT TTTAGTGCCG
TTTTCTCATA GGCAGGTTGT TGGCTATATC GTAGGCGTCT CAGACAGCGT GTCTTCAGGT
TTGGATGTTT CGCGCGTCCT TCCGATAACG CAAGTCCTGG CAGGTTCAGC GTTTGATGAG
CAGTCTGCGC AGGCAGCAGA GTGGATGAGC AAAGAATACG CTTGCAGTTA CGCAGACGCA
TTACATCCGT TTTTAGCACC TGGTCAAAAG GTTAAAGTCA CCAGAAAGGA CGCAGAATCT
CCATGGCAGC TTGTTTGTGA GAAATCTGGT CCTGTTGATG AGCGTTGGGT TGAGCTGACT
GAAAAGGCAA CCAACTTTAC GCCTGCGGCA AATGCGAGCA AGCAACGCTC GGTGCTTGAG
GCGTTGGCGC AAGGTGCGAT GAGGTTATCC GAGCTCTCGG CCACAATTCC AGGAGCTCGT
AGCGCGGTTA CTGCGCTGCA GAAAAAAGGC ATTGTTGAGG TCCGCACTCA GCGACAAATT
CGCGGAAGCC AAGAGGGATT GGGAACTACG CTTTCAAGTG GCGTAGCGCC ACGCCCTCAG
CAGCTTACTG AAGGCCAAAA ATCCGCTCTT GCAGCAATTG AGGCTGCACA AACTGCTGCC
CAGGGCGATG TTGTGCTTAT TGATGGTGTA ACGGGTTCAG GTAAAACTGA GGTGTATCTC
TCTGCAATTG AGAAGACTTT AGCAGCTGGT AAGGGTGCTG TGGTGCTTGT CCCAGAGATT
TCTCTTACCG CACAAACAGT TGGCCGATTC CGCTCACGTT TTGGTGAGCA GGTGGCTGTT
CTTCACTCAA AGCTTTCACT CGGTGAGCGT TTTGACCAGT GGGATTTGAT TAGGCAGGGG
AAGGCTCGCG TGGTAGTAGG TGCACGTTCT GCATTATTTG CACCGATCAA AAATCCTGGT
CTTTACATCA TTGATGAGGA ACATGAGGCC TCTTACAAGC AGGATTCACT TCCACGCTAT
CATGCAAGAG AAGTTGCTGC TCAGATGGCG CGTCTGCGCG GTGCCGCTCT GGTGCTTGGT
TCTGCAACAC CTTCACTCGA GAGCCTCTAC CGAACGGCTC AAGGAAGTTG GCGTGGTACC
AACTGGACGC GCGTTGCCAT GACCGAGAGG CCTGGCGTGG CGGTGCTTCC GCAGGTCCAG
GTAGTTGATA TGGCTTCTCA GTTCAAAAAC GGAGGCAGAT CGGTTTTCTC GGCAGCTCTT
GCTCTTGCGC TTCAAGAAAT AACAGAGCGT GGCGAGAAAA GCGTTCTACT CCTTAATCGT
CGTGGATTTG CAAACTTTTT GATGTGTCGT GAGTGTGGTT GTGTGCCCGA ATGTCCGCAT
TGCTCGACGT CTCTCACGTA CCATGAGCGC ACGCATTCTC TGGTCTGTCA CAGCTGTGGT
AGGCAATGGT CTCAGCGTGC GTACCCTAAT CCTTCCAGCA AATGTCCAAA CTGCGGCAGC
CGTTATATGG GTGCATATGG CGTGGGAACG CAGCGTGTAG AAGATGAGTT AAAGCTTCTG
CTTGGTGGCG ATGCACCAAT TATTCGTATG GACGCTGATA CCACGGCCAA AAAGGGAGAA
CATCAGAGAC TTCTTGAGCT CTTTGATGCA ACCCCTGGAG CGGTGCTCAT TGGTACGCAG
ATGATTGCAA AAGGCTTGGA TTTCCCAGAC GTTACCTTGG TTGGTGTTAT TAATGCTGAT
ACCATGCTTA AGCTGCCAGA TTTTAGAGCA GCTGAGAGAA CATTTGACTT GCTGGAACAG
GTTGCTGGCC GTGCAGGCAG GGGAGAAAAG CCGGGTAAAG TTATCATTCA GTCGTACTGG
TCAACACATC CTGCCATTGC TTCTGTTGTG ACTCATGATA GGCGTCCGTT TTTGGATGCA
GAGCTTAAAG AAAGAAGAGA AGGGGCTTAT CCGCCCTTCT CGCGCTTGTC TAATGTGCTT
TTCTGGGGTG CTTCAGAAAA AGAAGTTCGT CGCGTAGCAG ATCAGATGGC AGATGCTCTT
CACGCAAAGT TAGATGCGCA ATCCGGATGG GAGATTTTGG GGCCTGCTGA TTGTGTAAAG
GCTAAGGTAA AAGATAAGTA CCGCAGACAC ATTTTAGTAA AATCTCCCAT AGACGCTCAG
GTGGGAGAAA TTCTTTCTCA ATGTGCTGCT TCACTTGATA AAAGAGTGGG TATCAACATG
ACGTTAGATG TTGATGCTTA TGACATGATG TAA
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| Protein sequence | MPFAHVVLDI PTRALSGTFD YAIPSSLEET AVVGTTVLVP FSHRQVVGYI VGVSDSVSSG
LDVSRVLPIT QVLAGSAFDE QSAQAAEWMS KEYACSYADA LHPFLAPGQK VKVTRKDAES
PWQLVCEKSG PVDERWVELT EKATNFTPAA NASKQRSVLE ALAQGAMRLS ELSATIPGAR
SAVTALQKKG IVEVRTQRQI RGSQEGLGTT LSSGVAPRPQ QLTEGQKSAL AAIEAAQTAA
QGDVVLIDGV TGSGKTEVYL SAIEKTLAAG KGAVVLVPEI SLTAQTVGRF RSRFGEQVAV
LHSKLSLGER FDQWDLIRQG KARVVVGARS ALFAPIKNPG LYIIDEEHEA SYKQDSLPRY
HAREVAAQMA RLRGAALVLG SATPSLESLY RTAQGSWRGT NWTRVAMTER PGVAVLPQVQ
VVDMASQFKN GGRSVFSAAL ALALQEITER GEKSVLLLNR RGFANFLMCR ECGCVPECPH
CSTSLTYHER THSLVCHSCG RQWSQRAYPN PSSKCPNCGS RYMGAYGVGT QRVEDELKLL
LGGDAPIIRM DADTTAKKGE HQRLLELFDA TPGAVLIGTQ MIAKGLDFPD VTLVGVINAD
TMLKLPDFRA AERTFDLLEQ VAGRAGRGEK PGKVIIQSYW STHPAIASVV THDRRPFLDA
ELKERREGAY PPFSRLSNVL FWGASEKEVR RVADQMADAL HAKLDAQSGW EILGPADCVK
AKVKDKYRRH ILVKSPIDAQ VGEILSQCAA SLDKRVGINM TLDVDAYDMM
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