| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0833 |
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| Symbol | |
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| ID | 8413699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 920671 |
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| End bp | 923244 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022416 |
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| Product | leucyl-tRNA synthetase |
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| Protein accession | YP_003179853 |
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| Protein GI | 257784636 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0495] Leucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000149617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000103499 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAAAACG AGGAAGTACA GAACGTATCC ACCACAGGCG ATTTTCCTGT CTACGATGCT
GAAGCCATTG AAACCAAGTG GCAGCGCATC TGGGAAGAGC AGAATCTTTA CAAGACAGAA
GAAGACAGCT CAAGGCCTAA AAAATACGTT CTAGAGATGT TCCCTTATCC TTCGGGTGAT
CTTCATATGG GCCATGCCCG TAATTACACC ATTGGTGATG CTATGGCTCG TCAGGCTCGC
ATGCGTGGTT TTGATGTTCT TCATCCAATG GGCTTTGACG CATTTGGTCT TCCTGCAGAA
AACGCTGCAA TTAAGCATAA TACCCAGCCT TCTGTGTGGA CTCATAAGAA CATTGACCAG
GCTGTAAAGA CCATGTTCCG CATGGGCTTT GCCTACGATA AAGACCGTAT GTTTAATACG
TGTGACCCTG AGTACTATAA ATGGGGCCAG TGGATCTTTC TTAAGATGCT TGAGAAGGGC
TTAGTATATC GTGCTACAAG TCCTGTTAAC TGGTGTCCTA ATGACAAAAC TGTTCTTGCA
AATGAGCAAG TAGTTAACGG TAAATGTTGG CGCTGTGGTG CCGTTCCAGA GAAACGTGAG
CTCTCTCAGT GGTATCTGCG CATCACTGAT TATGCTCAGG AGCTTTTGGA TGATCTTGAT
CAACTTGAGG GTTGGCCAGA GCGTGTCCGT GCTATGCAGG CAAACTGGAT TGGACGTTCT
GAGGGTGCAG AGATTGATTT CATTCTGGCA GATACTGATG GTGTTACGCC AACTGATACC
AAGATGACAG TCTTTACTAC GCGTGCAGAT ACTATCTATG GTTGCACTTT TATGTTGCTT
CCACCGGAGT CTAAGCTTGC TGCAGAGTTG GTAGGGGATT CAGAGTATAA GGCTGCTTTT
GATGCTCTTC ATGAGGAAGC TGTAAAGGTT TCTTCTATTG ATCGACAGGG TACAGACCGC
GAGAAGCACG GTGTATTTAC TGGTCGTTAC GCGATTAATC CTGTTACCGG ACGGACTGTG
CCAATTTGGG TTGCTGACTA TGTTCTTCTC GACTATGGCA CTGGCGCTGT TATGGGTGTT
CCATCGGGCG ATAAGCGTGA CTTTGATTTT GCAAAGAAGT ACGACCTGCC TATTGTTCCT
ATCATTTGTG AAGAGGGAAC AGATATCTAT GAAGAGCTCA AGGGGGTTTC TGATTACAAA
GTAACCTCCG TTGACTGGGA CGGACCAATG GATACCGTTG GTGTTCTTGT CCAGTCTGGT
CCATTTACTG GCCTTCGTGG CGGTAAGCAT TCCGAGGCAG AAGAAGCTGT TGTTGCGTAT
TTGACTGAGC ATAGTGTTGG CCGTCGAACT GTTCAGTTCC GTCTTCGTGA TTGGCTTATT
TCTAGGCAGC GCTATTGGGG CAATCCAATT CCTATGATCC ATTGTGATTG CTGTGGTGAC
GTTCCTGTTC CTTATGATCA GCTTCCTGTC ATGCTTCCAG ACAATCTTGA TCTAGCTGCA
GGAGATACTC TTGCTGAGTG CAAGGAGTTT GTTGAGACTA CCTGTCCAAA GTGCGGAAAG
CCTGCAAAGC GCATTACTGA CACTATGGAT ACCTTCACGT GTTCTAGCTG GTACTACCTG
CGTTACTGCG ACCCGCACAA CACTGAGCTT CCTTTTTCCA AGGAATCTGT TGATCGCTGG
ATGCCTGTAG ATAACTATAT CGGCGGCATT GAGCATGCAA TTCTACACCT CCTGTATTCT
CGCTTCTTTA CAAAGGTCCT TCGTGATCTG GGCATGATTG ACATCGATGA GCCATTTAAG
AATTTGATGA CTCAGGGTAT GGTCAAGGAT GAGCACGGCG ATACCATGTC AAAGTCAAAG
GGTAACGTTG TGCCTCCAAG TTCTGTCATT GAGCCTTATG GTGCAGATAC AATGCGTCTT
GCTATTCTCT TTGTTGCTCC ACCAGAGAAG GATTTTGACT GGGACGAGAA GGCTATTGCG
GGTGCAAACC GCTTTATCAA ACGCGCATGG CGTGTAGTGT GGGAGCTCTC TCGTACTGCT
GATGCTTCTG CCGTACTCGA CCACACTGCT TTGGATTCAA AGTCGCTTGA GCTCAACCGT
GTTCTTAATG CTATGGGAAT CCGTTGTACT ACTGAGTTTG ATAAAGGTCA GTTTAATACT
GCAATTTCTG CAGTTATGGA GCTTGTTAAT GCAGCAAGCG CTTACATTAA CGAGGTCCCT
GCAGAGTCAA GAGATGCTGC ACTTTGCTAC AAGGTTGCAA ATGACGTTGT AGCTATGCTG
GCTCCAATTA TCCCTCACTG GGCAGAGGAA CTCAGCCACG AGGCTTTGGG CAAAGATGTT
CCTGTTTACC ATCAACCTTG GCCAGAATTT GATCCAGAAC AAGCAAAGAG TAATACGGTT
GAGATTGCCG TTCAGCTTAA GGGTAAGGTT CGAGCACGTA TTGAGGTTTC TGCCGATGCT
TCTGAGGAAG AGCTTACTGC AGCCGCAACC AAGGCAATTG CCGATCAGCT TGAGGGCAAA
GAGATTAAAA AAGTTATTGT TGTTAAGGGG CGCCTTGTGA ATATCGTTGC CTAA
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| Protein sequence | MENEEVQNVS TTGDFPVYDA EAIETKWQRI WEEQNLYKTE EDSSRPKKYV LEMFPYPSGD
LHMGHARNYT IGDAMARQAR MRGFDVLHPM GFDAFGLPAE NAAIKHNTQP SVWTHKNIDQ
AVKTMFRMGF AYDKDRMFNT CDPEYYKWGQ WIFLKMLEKG LVYRATSPVN WCPNDKTVLA
NEQVVNGKCW RCGAVPEKRE LSQWYLRITD YAQELLDDLD QLEGWPERVR AMQANWIGRS
EGAEIDFILA DTDGVTPTDT KMTVFTTRAD TIYGCTFMLL PPESKLAAEL VGDSEYKAAF
DALHEEAVKV SSIDRQGTDR EKHGVFTGRY AINPVTGRTV PIWVADYVLL DYGTGAVMGV
PSGDKRDFDF AKKYDLPIVP IICEEGTDIY EELKGVSDYK VTSVDWDGPM DTVGVLVQSG
PFTGLRGGKH SEAEEAVVAY LTEHSVGRRT VQFRLRDWLI SRQRYWGNPI PMIHCDCCGD
VPVPYDQLPV MLPDNLDLAA GDTLAECKEF VETTCPKCGK PAKRITDTMD TFTCSSWYYL
RYCDPHNTEL PFSKESVDRW MPVDNYIGGI EHAILHLLYS RFFTKVLRDL GMIDIDEPFK
NLMTQGMVKD EHGDTMSKSK GNVVPPSSVI EPYGADTMRL AILFVAPPEK DFDWDEKAIA
GANRFIKRAW RVVWELSRTA DASAVLDHTA LDSKSLELNR VLNAMGIRCT TEFDKGQFNT
AISAVMELVN AASAYINEVP AESRDAALCY KVANDVVAML APIIPHWAEE LSHEALGKDV
PVYHQPWPEF DPEQAKSNTV EIAVQLKGKV RARIEVSADA SEEELTAAAT KAIADQLEGK
EIKKVIVVKG RLVNIVA
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