| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0826 |
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| Symbol | |
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| ID | 8413692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 912676 |
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| End bp | 913713 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022409 |
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| Product | riboflavin biosynthesis protein RibF |
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| Protein accession | YP_003179846 |
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| Protein GI | 257784629 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.908796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000385978 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAACAAGG TAGAACGCAT AGCACAATCT GTTTTGTTTG GAAGTCAGCT GCCGACTCCG
CTTGAGCTTG GCGATGCTGA CTTTTATACG CTACATTCTG ATTGCTTCAA GCAACCTTGT
GTGTGCGTAC TTGGTGTGTT TGACGGTCTT CACGAGGGCC ACCAAGGGCT TCTCGCCATC
GCAAAAAAAG ATGCCGAGGC ACGCAAAGTG CCGCTTGTGG CTGTAACATT TCTGCCAGAT
CCTGTTGAGG TGTTGTTTGA CGGATCTCCT CAACGATTGC TCTCGGGAGA AGATAGGCTT
CGCGCGCTTG CCGCTTGGGG AGTAGATGGT ATTCTGGTAC ACCATTTTAC CCGCGAGTTT
GCGGCTTTGA GTGGCACGCA ATACGTAGAA AGTAAGTTGC TTCCATGTGT GCCGGCCGTG
TCCGTTCATG TGGGCTCTGA CTTTGGGCTT GGAGCTCAAG GTGCTGAAGG AAGCGCATTG
CTTGCCGCAC TTGGGCGCCA GCATGGCTTT GAAGTTCATG CCCATGAGCT CTTTTGTTCG
GGTGGCGAGA AAATCTCTGC AACTCGCATT AGAAATCTGC TGGGACAAGG CAGGGTTGAG
GATGCGGCAA GTCTGTTAGG TCGTTGGCAC TTTGTGAGCG GTGTGGTCAA GCATGGTCGT
GGCCAGGGTA CTGGATTTGG CTTTCCTACT GCAAATGTTG CACTTGACGT GCGTGATTGT
ATTCCTCAAG ATGGCGTGTA TGCGTGCTAT GTTGTTCATG GTGCAACAGC ATGGCCTGCT
GCGGTTAATG TGGGAAAAGC TCCTTCATTT GAATCTCAAA CAGGACCTTT GCTTGAGGCT
AATCTTTTAG GGTTTAGCGG CAACTTATAC GGCTCTCAGG TTCAGACGGT GTTTGTGAAA
AGACTGAGAG AATCTAAAAA ATTTGATTCA CTGCAAGACC TTAAGCAAGC CGTTCGTGGA
AATATAGATT GGGTGGCCCA GAATCTGGGT ACGACTTCAT ATAATTTAGA AAGCGGGGAG
GTGGAAGATG ATAACTGA
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| Protein sequence | MNKVERIAQS VLFGSQLPTP LELGDADFYT LHSDCFKQPC VCVLGVFDGL HEGHQGLLAI
AKKDAEARKV PLVAVTFLPD PVEVLFDGSP QRLLSGEDRL RALAAWGVDG ILVHHFTREF
AALSGTQYVE SKLLPCVPAV SVHVGSDFGL GAQGAEGSAL LAALGRQHGF EVHAHELFCS
GGEKISATRI RNLLGQGRVE DAASLLGRWH FVSGVVKHGR GQGTGFGFPT ANVALDVRDC
IPQDGVYACY VVHGATAWPA AVNVGKAPSF ESQTGPLLEA NLLGFSGNLY GSQVQTVFVK
RLRESKKFDS LQDLKQAVRG NIDWVAQNLG TTSYNLESGE VEDDN
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