Gene Apar_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0802 
Symbol 
ID8413667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp884496 
End bp884759 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content52% 
IMG OID645022384 
Productribosomal protein S20 
Protein accessionYP_003179822 
Protein GI257784605 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.939654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.631943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAACA TCAAGTCTCA GAAGAAGCGT ATTCTCACCG CTGAGAAGGC ACGCCAGCGC 
AACAAGGCTG TCCGCTCCGA GCTTAAGACT GCTATTAAGG CAGTTCGCAC TGCTGTTGAG
GCAGGCCAGC TTGAGGACGC ACAGGTTGCT GCTAACAAGG CATCTCGTCT TCTTGACAAG
GCTGCTTCTA AGGGCATCGT ACACAAGAAT CAGGCTGCTC AGCGTAAGAG TGGCGTTCAA
AAGCTTGTTA ACACCCTTAA GTAG
 
Protein sequence
MANIKSQKKR ILTAEKARQR NKAVRSELKT AIKAVRTAVE AGQLEDAQVA ANKASRLLDK 
AASKGIVHKN QAAQRKSGVQ KLVNTLK