Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0795 |
Symbol | |
ID | 8413660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 875721 |
End bp | 876992 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645022377 |
Product | RNA modification enzyme, MiaB family |
Protein accession | YP_003179815 |
Protein GI | 257784598 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.134555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.773593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCATG GTATTGCACT TATAAATCTT GGATGCAGAG TTAATCGAGT TGAGCTTGAT TTAATGGCAG AGTCTTTGCT TCGTATGGGT TGCCATATTG TTGAAGAAGA TGAAGCACAG GCAATTGTTA TTAATACCTG TGCAGTTACT GCTGAAGCAG AAGCTAAGAC GAGAAAAGCT GTGCGTAAAG CAGCGCTTAT GCCTGGAGCT CCTCTTGTGG TGGCAACTGG TTGCGTTGCA AGTCTTTTTG CTGAAGAGCT TGCTTCGCTT GCCCCAAATG TTGTTGTAGA AGCCGAGAAG GACAAAGTTG CAGATAGAGT TCTTGAAGAG CTTGGTTTTG CTCCTGAATC AGTAAGTGAT GATGGTCTTG TTATTTCAAA GCCAACACCT ACTGGTCGTA CGCGTCCCGG TATCAAAATT CAAGATGGCT GTGATAATCG ATGCACCTTC TGTATTGTGT GGAAAGCACG TGGTGCAGGA AAGTCTCTTG ATCCTCGTAA AGTTGTTTCA CAGGTAAAAG ACGCTATGAG CAGAGGTGCT CAGGAGGTTG TTCTTACAGG AATTAATCTT GGTAGTTATA AAGTTCAACT TGAAGATGAG GGTGAGAAAA TCTTCAGGCT CCCAGATCTT CTCGAGTATG TGCTTGAAAA AACTGAGGTT GGACGCCTAA GACTTTCTTC TCTTGAGCCA CCTGATGTAA ATGCACGCCT AGTGAAGGTA ATTGCTGCAT CCAACGGAAG AGTTGCACCA TTCTTACACA TTTGTCTTCA GTCTGGATGT GACGCAACGC TTGCCCGTAT GGGCAGGGTA TATAGGACAG AGCTCTATCG CAAGGCTGTT GAGGAAGCGC GTTCAGAGCT GTCAACCATC GCATTAGGAA CAGACCTCAT TGTTGGTTTT CCAGGAGAAA CCGATAAAGA ATTTGAAGAG TCATATGAGT TTTGTCGTCA GATGGGCTTT TCAAAAATGC ATGTATTTAG ATATTCCAAA CGTCCTGGAA CGCCTGCAGC CACTGCTCCA AATCAGGTTA ATCCAAAGGT GATGGCCGAG CGTGCAAAGA AAATGCGTGA TTTGGGTAAT AAAATGCGTT TTGATGCTGC CAAGAAGCTT ATTGGTACCT GCGATAATGT GGTGGTACAG TATCCAGGTA AAGGAATTTC TGGAGGTCTT TTTGACGTTC AGGTTGACCC TACCATTGAA CTTGATGAGT TAGTTGCTAT GCGCTTTGAT GAAGTTTTAC CTAATGGAAC ACTAAAAGCT ACTCGTTTAT AA
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Protein sequence | MAHGIALINL GCRVNRVELD LMAESLLRMG CHIVEEDEAQ AIVINTCAVT AEAEAKTRKA VRKAALMPGA PLVVATGCVA SLFAEELASL APNVVVEAEK DKVADRVLEE LGFAPESVSD DGLVISKPTP TGRTRPGIKI QDGCDNRCTF CIVWKARGAG KSLDPRKVVS QVKDAMSRGA QEVVLTGINL GSYKVQLEDE GEKIFRLPDL LEYVLEKTEV GRLRLSSLEP PDVNARLVKV IAASNGRVAP FLHICLQSGC DATLARMGRV YRTELYRKAV EEARSELSTI ALGTDLIVGF PGETDKEFEE SYEFCRQMGF SKMHVFRYSK RPGTPAATAP NQVNPKVMAE RAKKMRDLGN KMRFDAAKKL IGTCDNVVVQ YPGKGISGGL FDVQVDPTIE LDELVAMRFD EVLPNGTLKA TRL
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