Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0794 |
Symbol | |
ID | 8413659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 874750 |
End bp | 875709 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645022376 |
Product | PhoH family protein |
Protein accession | YP_003179814 |
Protein GI | 257784597 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00178873 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.56328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCAA CACAGATTCG CTTAACTATT CCTGATTCAG TGGATCCTTT ATACCTTACG GGTCCAGCTG ATAGTTTGCT CAGAGAAATT GAAGCATCAT GTGCGGCTCT TATTTCAGTT AGAGGCAAAG CTATTTTTCT ATCTGGAACT TCTCAAGAAA TAGAACAATT AACGCTTATT TTTTCTCACT TGATTCAAAT GGTCGAATCA GGCTCAAGGC CTACACTTGA AGACGTAAAG TTTCTGCTTG ACAACACAAA AAGAAATGCC AACTTAAAGC AGGCGGGAAC ACGTACGCTG TTTGTTACAC ATAAGGGCAA AGCAATTCAA CCTAAAACGC AAGGTCAGAT TGCTTATACC AAGGCGATAG CAAATAACTC CATAACATTT GGTACTGGTC CCGCCGGTAC TGGTAAAACG TATTTGGCTG TTGCTATGGC ACTCGCCGCT TTGACTTCAC AACAAATCAG CAGAATTGTG CTGGTAAGAC CTGTTGTTGA AGCTGGAGAG TCACTTGGTT TTCTTCCGGG CACACTTCAA GAGAAGCTAG ATCCCTACAT TAGACCGCTC TACGATGCCC TCTTTGATAT GACTTCTATG GAGTATGCAA ATAACCTTAT TGAGCGGGGA ATTGTTGAGA TTGCTCCGCT TGCATTCATG CGTGGTCGTA CCATGAATGA TGCGTTTGTT ATTTTGGACG AAGCACAAAA TGCTACGCCT GAGCAGATGA AAATGTTTCT GACTCGCTTG GGTTTCTCGT CAAAGTTTGT TATTACGGGC GATGCAACGC AGCGAGATCT TGTGGGAAGA AGCGGCCTGG ATGTTGCTCG ACAGGTGCTG AGTAACCTTG AAGACGTTGC TTTTGTTGAT TTAGACAGAA ATGATATTGT TCGCCACACT TTGGTTGGTA AGATAGTTGA TGCATACACT GCGTATGAGA AGAAACAGCT AGGGGAGTAA
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Protein sequence | MEPTQIRLTI PDSVDPLYLT GPADSLLREI EASCAALISV RGKAIFLSGT SQEIEQLTLI FSHLIQMVES GSRPTLEDVK FLLDNTKRNA NLKQAGTRTL FVTHKGKAIQ PKTQGQIAYT KAIANNSITF GTGPAGTGKT YLAVAMALAA LTSQQISRIV LVRPVVEAGE SLGFLPGTLQ EKLDPYIRPL YDALFDMTSM EYANNLIERG IVEIAPLAFM RGRTMNDAFV ILDEAQNATP EQMKMFLTRL GFSSKFVITG DATQRDLVGR SGLDVARQVL SNLEDVAFVD LDRNDIVRHT LVGKIVDAYT AYEKKQLGE
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