| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0787 |
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| Symbol | |
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| ID | 8413652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 867546 |
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| End bp | 869210 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022369 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003179807 |
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| Protein GI | 257784590 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000129126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.323008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGA AAGACCCAGC TCTTAAAGTC ATTCCTATGG GCGGACTTGA TGGCATTGGC
AAGAACATGA CCGTTTTTGA GTACGGTAAT GATATGGTGC TTGTTGATGC TGGTTTGATG
TTCCCAGATG ACGAACAGCC TGGTATTGAC CTTGTTTTGC CAGACTACAC CTATGTACTA
GAAAACGAAG ATAAGCTTCG CGGTATTTTG ATTACCCACG GTCATGAGGA TCACATTGGT
GCTCTTCCGT ACCTGCTTAT GGATCTTACT CGTAAGGTAC CAATTTATTC CAGTAAGCTC
TCGCTTGGCT TTATTGAAGG TAAGCTTGCT GAGCACAAGA TTGTGGGCAC TAAGCTTCGT
GAGGTTACTG ATGGCTCTAA GGTACAGCTT GGTGCCTTTG ACATCACGTT CTTCTCGATG
ACCCACTCTA TTCCTGCAGC TTTTGGAATT CACATGAAGA CCCCTGCGGG AACACTTATT
CACTCTGGTG ACTTTAAGCT TGATCAGACT CCTATTGATG GCGTGCGTCC AAATTACGCT
GCTATTACTA AGTTTGCCTC TGAGGGGCTT GACCTGCTGC TTTCTGACTC GACTAACGCC
AACCGCCCAG GTATGACTCC ATCTGAGGCT TCTGTTGGTG CGGCACTTCG TCACATCATT
AAGAATGCAA CTGGTCGTGT CTTTGTTGCG TCGTTCTCAA GCCACATTCA CCGTCTGCAG
CAGGTGTGTG ATGCCTCTGT GGCGGTAAAG CGTAAGGTTG TTGTTACTGG TCGCTCTATG
ATTACCAACA CAAAGATTGC GCGTGAGCTT GGCTATCTTA ATATTGCTGA TAAAGACATC
ATTGATGCTT ACGATGTTGA TAAACTTGCA GATGATCGCA TTGTTGTTTT GTGTACCGGT
TCTCAGGGAG AGCCTCTAAG TGCTTTGGCG CGTATGGCAA ATGGAGAGCA TAAATCGCTT
TCCATCCGTC CTCAAGACAC CGTAATTATC TCTGCAACTC CTGTACCAGG TAACGAGAAG
AGCGTTCAGT CCATTATTAA CGCGCTCTCT AAGATTGGTT GCGAGATTTA CGACAAGTCA
AAGGCACTTG TTCATGTTTC TGGTCATGGA AGTCAGGAAG AACTCAAGCT GATGCTTGGT
ATGGCTCGTC CAAAGAACTT CATGCCAGTC CACGGCGAAG CTGTTCACCT GCGTGCCCAT
GCAGAGCTTG CTCAGCAGAT GGGCGTTCCT GCTAACCGTA TTTTCATTCT GGATAACGGC
GACACGCTTG AGATGAGAAA CGGAAAAGTT ACGCGTGGTA AGACGGTTGA GTCTGGTGTA
GTGTACGTTG ATGGCCTGTC TGTCACTGAT GCTAACCCTG TTGTTCTTCG TGATCGTCAG
CGTCTTTCCC AGGACGGTAT TGTTACAGCT GTGGTAACCC TTGTTGGTCG TAATCTTAAA
CCAGGCGTTG TTGAGATTTC TGGTCGTGGT GTTTCATTTG CTGATGATGA TGAGCTCATG
AACGACGCAC AGAATCTTGT GAGAAATTCA ATCGAGAAAG CCTCTAAGTC CGAAGGTGCA
AATATTGAAG CAATGAGGAA GAGTGTTCGC AATGCTCTTT CTAACTTCCT TTGGAGCAAA
ACTCGTACTC GACCAATGGT TATTCCGGTC ATTATGGAGG TATAA
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| Protein sequence | MPKKDPALKV IPMGGLDGIG KNMTVFEYGN DMVLVDAGLM FPDDEQPGID LVLPDYTYVL
ENEDKLRGIL ITHGHEDHIG ALPYLLMDLT RKVPIYSSKL SLGFIEGKLA EHKIVGTKLR
EVTDGSKVQL GAFDITFFSM THSIPAAFGI HMKTPAGTLI HSGDFKLDQT PIDGVRPNYA
AITKFASEGL DLLLSDSTNA NRPGMTPSEA SVGAALRHII KNATGRVFVA SFSSHIHRLQ
QVCDASVAVK RKVVVTGRSM ITNTKIAREL GYLNIADKDI IDAYDVDKLA DDRIVVLCTG
SQGEPLSALA RMANGEHKSL SIRPQDTVII SATPVPGNEK SVQSIINALS KIGCEIYDKS
KALVHVSGHG SQEELKLMLG MARPKNFMPV HGEAVHLRAH AELAQQMGVP ANRIFILDNG
DTLEMRNGKV TRGKTVESGV VYVDGLSVTD ANPVVLRDRQ RLSQDGIVTA VVTLVGRNLK
PGVVEISGRG VSFADDDELM NDAQNLVRNS IEKASKSEGA NIEAMRKSVR NALSNFLWSK
TRTRPMVIPV IMEV
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