Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0773 |
Symbol | |
ID | 8413638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 852831 |
End bp | 853769 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645022355 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_003179793 |
Protein GI | 257784576 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0435876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.318926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCTC ATGGCTCAGT TATCTGCATT GTAGGTCCTA CGGCTTCGGG CAAAAGCTCC TTGTCTGAGC TGGTAGCTAA GCAGCTTGAG ACTTCTGTCA TTTCTGTTGA CGCAATGCAG ATCTACTGTG GCATGAATAT CGGTACTGCT AAAACTCCTA TTGAGGAGCG AGAAGTTCCT CTTCTGATGG TAGATTGTGC CAACATCTCA GAAGAATACT CTGTTCAGAT GTTTCAGATG GCAGCTCGCG CAGAAGCTCA TAAGCTCATT GATGCTGGTA AAACCCCCGT ATTTTGTGGT GGAACAGGCC TCTACCTTGA TTCAATTATT GATCAGATGG AGTTTCCTTC TGGATCAATT GAGTCTCCAG TAAGAACTCG ATATGAAAAG CTTGCAGAAG AACTGGGTGC AGAGGGCTTG CACGATTTTC TCGCTTCAAA AGATGCAGCA AGCGCAGAGC TCATTCACCC AAATAACGTA CGACGTATTG TAAGGGCTTT AGAGCTCTTG GAAGAGGGCA AGTCGTATGC TATTCATCAT AAGGGACTAA AGGCTCATAC ACCGTATTTT GACGCTCAGA TATGGGGTCT TACGATGGAT CGTCAGCGGC TGTATGAGCG AATCAACTTC CGAGTTGACC TTATGTTTAA ACAAGGACTT GTTGAAGAGG TTCAGTGCCT TATTGAGACT GGTTTATCTG AGCATTGCAC AGCTGGCCAG GCAATTGGCT ACAAAGAGTT CTTTGCGTAC TTTGCAGGAG AGCAATCACT TGAGCAAACG TGTGAGCTTA TTAAGCAGCA CACCAGACAG TATGCTAAGC GGCAGATTTC TTGGCTTAAA CGCGATGGTC GAGTCAGGTG GCTTGATATG GATCAACTTA CACCTGAAGA TGCACTTAAA ATGATTATTG CGCAGCATTC TGACGTACAA TGCCAGTAG
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Protein sequence | MSSHGSVICI VGPTASGKSS LSELVAKQLE TSVISVDAMQ IYCGMNIGTA KTPIEEREVP LLMVDCANIS EEYSVQMFQM AARAEAHKLI DAGKTPVFCG GTGLYLDSII DQMEFPSGSI ESPVRTRYEK LAEELGAEGL HDFLASKDAA SAELIHPNNV RRIVRALELL EEGKSYAIHH KGLKAHTPYF DAQIWGLTMD RQRLYERINF RVDLMFKQGL VEEVQCLIET GLSEHCTAGQ AIGYKEFFAY FAGEQSLEQT CELIKQHTRQ YAKRQISWLK RDGRVRWLDM DQLTPEDALK MIIAQHSDVQ CQ
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