Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0750 |
Symbol | |
ID | 8413615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 832821 |
End bp | 834044 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645022332 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_003179770 |
Protein GI | 257784553 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000167123 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTCC TCCAGCACAA CCATGTATCT TTGCGCCAGC TCTCTTATAA GACGCTGGCT TTTCTTGTAA GTTTGCTGCT TGTGATTGTC CTCACCGCTC CTTTTATACC TGCATCTAAG GTTCTGGCAG AAAATACCTC TTCTAACAAG TCTTCTGTAA CCGATGAACC AAAACTTACC GAGGCAACTA CTGCAATTGT TACTGATTCA CAGGGAAACG TTCTTTGGAG TAAAAATCCC GATCAAGAGC TTCCTATGGC ATCCATCACT AAGGTCATGA CTGCGATTGT TGCACTTGAT TCAGGTGTTA ATCTTGATGA GCCTTGTAAA ATCACTGTTC CAGATCTTGA AGAAGGCTCA CAGGTTGCAG GTTTAACCTC GGACGATACT CCAACACTCA GGCAGCTTAT TATGATGATG TTGGTATATT CGGCAAATGA CGCTGCTTAT AACATTGCCA TCAACGTATC CGGCTCTCAG CAGGCCTTTG CTGATCAAAT GAACAAGAAA GCCGCTGAGA TTGGCATGAC TCATACGCAA TTTCAGAATC CTCACGGCTT AGATGCCGAC GGTCATTATT CAACGGCACG AGACCTTGCT CTGATGGGTC GTTATGCTCG AGAACATTAC CCACTAATCG CAAGTGCTGT TCATACCAGG TCATACACCA CAACGGTAGG AGGGGAGCAA CGTACATTCC ACTCAACTGA TGATCTTATG GATACTTATC GTGGTCTTCT CGGCATCAAA ACAGGCGCAG AAGATTCTGG TACCGCTTTC TTAGGAGCTT CCAAGCGTGG AAACATCACG CTTTATACCT GCGTGCTTGG TTGCGAGACC ATACAAGGTC GTTTTGACGA TACAGCCATA CTGATGAACT GGGCTTATCG CAATTACAAC CGTATAAGCG TTCAGCGTGC TGACCAGATT ATTCAAATCC GTCCCAGTGA AGATAATTTC TTGTTCTCTA CAGTAGTTAA ACCACTAACC TCCACTACGT ATATGGCTTG GCCAGGATCT AAAGATTTTA CGTATCAGAC AACTATGCTT TCACTCAACT ACCCAGTAGC TGATGAGCAA CTGATTTCTT CAACAGACTG GTCGCAGGAT TCTGCGAGAG TAGGAACTAC CATTACTCAG GCGCATGTCA CACTTTGGAC TATTCCAGCC TACAACCTCT TTGACCTCCA TTCGGTTGCT CCGTATCTCT TTGGAGAAAA CTAA
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Protein sequence | MTFLQHNHVS LRQLSYKTLA FLVSLLLVIV LTAPFIPASK VLAENTSSNK SSVTDEPKLT EATTAIVTDS QGNVLWSKNP DQELPMASIT KVMTAIVALD SGVNLDEPCK ITVPDLEEGS QVAGLTSDDT PTLRQLIMMM LVYSANDAAY NIAINVSGSQ QAFADQMNKK AAEIGMTHTQ FQNPHGLDAD GHYSTARDLA LMGRYAREHY PLIASAVHTR SYTTTVGGEQ RTFHSTDDLM DTYRGLLGIK TGAEDSGTAF LGASKRGNIT LYTCVLGCET IQGRFDDTAI LMNWAYRNYN RISVQRADQI IQIRPSEDNF LFSTVVKPLT STTYMAWPGS KDFTYQTTML SLNYPVADEQ LISSTDWSQD SARVGTTITQ AHVTLWTIPA YNLFDLHSVA PYLFGEN
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