| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0749 |
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| Symbol | |
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| ID | 8413614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 832077 |
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| End bp | 832808 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022331 |
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| Product | CDP-alcohol phosphatidyltransferase |
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| Protein accession | YP_003179769 |
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| Protein GI | 257784552 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
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| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000801084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCAAACTA GGCAGCAGCT AGCTAATCAA GTAGCATCCC AAATTAAAGA AGCAGCAGAC
GCTAATGCAG CAAAAGCTCA GGCAGAAGGT ACTATTACTG ATCCAGTTGG TAGTTCTAAC
AATCCTTCCA ATGCTATTTT TACCGTTGCA AACGTTATTA CATTTTGCAG ATTGATTCTT
ACAATTGTCT TCCTCGTTCT CTTCTCAACA GGTGGAAATC GTTGGGTTGC GCTTGGTTGT
TATGTAACCG CAGCTGTCAC TGACTTTCTT GACGGTCAGA TTGCTCGTAG AACACAGACC
GTCAGCTGGC TGGGTAAAAT CATGGATCCT ATCATGGATC GAGTCCTTCT TATTACTGGT
GTTCTCGGGC TCCTAATTAT TGGTGAGCTT CCTCTTTGGA TTCCGCTGTT TGTTATTGGA
CGAGACGTTT ACCTTACCCT GGGTGCACTT GTAGTTCGCA AATTCCGTAG ACGTCCCATT
GATGTTGCCT TTGTAGGTAA AGCTGCAACT GCATTTTTGA TGACTGGCTT TAGCCTGCTT
CTCCTAGGCA TTCCCGTTGT TTCCGGACTT GGACTAGTAA ACGTTAACTG GCTTCCAGGT
CTTAATTCTG AAAGTAGTGC TCTAGGCATC TTCTTTGTGT ACATAGGAAT TATTTTCTCG
GCAATTACCG CCATTGTTTA TACTGTTGAA GCGGCTAAAA TAGTTAAAGA TAGTAAAATC
ACTCAAGCAT AA
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| Protein sequence | MQTRQQLANQ VASQIKEAAD ANAAKAQAEG TITDPVGSSN NPSNAIFTVA NVITFCRLIL
TIVFLVLFST GGNRWVALGC YVTAAVTDFL DGQIARRTQT VSWLGKIMDP IMDRVLLITG
VLGLLIIGEL PLWIPLFVIG RDVYLTLGAL VVRKFRRRPI DVAFVGKAAT AFLMTGFSLL
LLGIPVVSGL GLVNVNWLPG LNSESSALGI FFVYIGIIFS AITAIVYTVE AAKIVKDSKI
TQA
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