| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0737 |
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| Symbol | |
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| ID | 8413601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 816808 |
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| End bp | 818553 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022318 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179757 |
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| Protein GI | 257784540 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAGT TGCTCTCTAA GTTTGTATGG CCAAAGTATG GTCGTAAGAG TTTTGTTGCC
TTACTTTGTA AAGTCGTTGA AGTTATTGGT GATCTTCTTA CACCATTAAT TATTGCGCGC
ATGATTGACC TAGGTATTCA CGGGGCAAAC ATGTATGACA TTATTCGTTA TGGCATTTTA
CTGGTAATCA TTGCTGTTGT AGGCTTCTGT TTTACAATCG TCTGTCAGAA AATTGCCTCT
ATTGTGTCTC AACGCACGGG AACTGACCTG CGTAATGAGT TATTCAAGAA GATTCAAGAA
CTCTCAAGTG CTGATATTTA TACACTTGGA ACAGACACCT TAGTAACAAG GCTCATCAAC
GATGTTAATC AAGTGCAGGT AACTGTTGCT CTAGGCATAC GTCAGCTGGT CAGATGGCCA
ATCCTTGCCG CTGGTTCCAT TATTGCAACC CTTATGCTTG ACGCTCAGCT TGGTATGGTC
TTTTTACTGG CAACTGTACT AGTAGCAGCT ATTTTCTTCT TTGTCGCACG TAAATCTACT
GCACTTTTTA CTGAACTGCA GAAACGCCTT GATGCTGTTT CTTTGTATAT GCGACAAATG
CTTTCTGGTA TTCGCGTAAT TAGAGCATTT AGACATGAGG CAGAAGAGAA GGCTCAGTTC
TCCGAGGCAG TTTTAGCTCA GACAGACGCG GCAACTAATG CTGCAAATTA TTCGGCTCTT
CTAAACCCCG CAACCTTCCT TGTCATGTAC CTGGGAATTG CGGTAACACT TTGGCTTGCA
GCTCCTCAGA TTACCTCTGG TACGCTGTCT CAAGGCACTG TAGTTGCTCT TGTCAGTTAT
ATGACCAGCG CGCTTTTAGC TATTGGATAC GTTGCCAACC TAGTTATTAT CATCACACGT
GGAACCGCAT CTGCTGCACG TGTTATGGAA GTGCTTAACA CTAAACCAAC GCTCACCGAT
GAGGAAAACA AGCGGATCAA CCTCACTGAA TCTGACTTTT CCGCCAATGC CGTCGTGTTC
AAGGATGCCT CGCTTGTCTA TGACGGTGGA GGAGAACCCG CTCTCTCTGA TATTAATCTC
TCACTACAGG CTGGTCAGAC GTTGGGTATT ATCGGCGGTA CTGGTTCTGG TAAGTCCAGT
TTTGCTGCCC TTATCCCGCG TCTTTTTGAC ACAGAGACTG GCTCAGTAAG CGTCTTTGGT
CACGACGTCA AAACTTATAC GTTTGAGCAG CTACGCTCCC TTATTGGCTA CGTTCCGCAG
CACACCTCGC TGGTCAGCGG TACTATCCGC ACAAACCTTT GCTGGAAGAA TCCAAACGCT
ACCGACGAGG AACTTTGGAA AGCTCTTGAA GTTGCTCAAG CAGCAGACTT TGTCCGGGAG
AAACCCGATC AGCTTGATAG CATTGTTGAG CGTGGTGGAA AGAACTTCTC GGGTGGTCAG
CGTCAACGTT TGACCATCGC TCGCGCTTTG GTGGGAAGCC CACGCATTGT CATCTTGGAC
GACGCTGCCT CCGCACTTGA TTTTGCTACG GATGCTCACC TCCGTGCGGC ACTCCGCAAA
CTCAGTGCAA CCACTACGAG CATCATTATT TCGCAACGTG TAGCTGCGGT TATGCAGGCA
GACAAGATTC TTGTTCTTGA CCATGGCAAA CAAGTGGGAC TGGGAACACA CAAAGAACTT
CTCGCCACAT GCCCACTCTA TAAAGAGATT TGTCTCTCAC AGCTTCGTCC TGAGGAGGTG
GAGTAA
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| Protein sequence | MGELLSKFVW PKYGRKSFVA LLCKVVEVIG DLLTPLIIAR MIDLGIHGAN MYDIIRYGIL
LVIIAVVGFC FTIVCQKIAS IVSQRTGTDL RNELFKKIQE LSSADIYTLG TDTLVTRLIN
DVNQVQVTVA LGIRQLVRWP ILAAGSIIAT LMLDAQLGMV FLLATVLVAA IFFFVARKST
ALFTELQKRL DAVSLYMRQM LSGIRVIRAF RHEAEEKAQF SEAVLAQTDA ATNAANYSAL
LNPATFLVMY LGIAVTLWLA APQITSGTLS QGTVVALVSY MTSALLAIGY VANLVIIITR
GTASAARVME VLNTKPTLTD EENKRINLTE SDFSANAVVF KDASLVYDGG GEPALSDINL
SLQAGQTLGI IGGTGSGKSS FAALIPRLFD TETGSVSVFG HDVKTYTFEQ LRSLIGYVPQ
HTSLVSGTIR TNLCWKNPNA TDEELWKALE VAQAADFVRE KPDQLDSIVE RGGKNFSGGQ
RQRLTIARAL VGSPRIVILD DAASALDFAT DAHLRAALRK LSATTTSIII SQRVAAVMQA
DKILVLDHGK QVGLGTHKEL LATCPLYKEI CLSQLRPEEV E
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