Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0685 |
Symbol | |
ID | 8413546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 764296 |
End bp | 764934 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645022263 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_003179705 |
Protein GI | 257784488 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR00488] putative HD superfamily hydrolase of NAD metabolism |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000109701 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0222336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGAA CACTTATATC AAAAGATATT CTTTATACCC TAGAACAACA GACGCTTATT AATCAGCTGG AGTCTGATCT GAAGTCTCAT ATGTATGACA AGAATCCTAA ACGTTTTGCA CACTCTATCT CTGTTGGACA TTGTGCAGAA ACGCTTGCAC AGGTTTATGG TGCAGATATG TTTAGCGCTC GTGTTGCAGG TATTTTGCAT GATTGGGAGA AGTTACTCTC TGACGCAGAT ACCCTTGAAC TGGCAGAGCG CTTTCGTATT CAAGTAGAAG CGCCTTATCA GAAAATTGTA GGACTCTTGC ATGGTCCTCT CGCCGCAAAA ACTCTACCAG CAATCTATCC TTGGCTCTCT AATGAGATTC TCAGTGCTAT TCAGAAGCAC ACCGCAGGTG ACCGACAGAT GAGCAAGCTG GATAAAATTT TGTATGTAGC AGACCTTATT GAACCGCTGC GTCCAAACTT TACAGCAGTT GAAGAGTCAC GAAACGTATA TTTACGCGGT GGTTCTCTCG ATGAGCTTTA TGAGTCGGCG TTTTGTAACG TTATGATGTA TGTAATTTCA TCAAGAAGGT ATTTGTATCC AAACTCAATT GCCCTATACA ATGAGATGAT TGAAAAGACA TCTAAGTAG
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Protein sequence | MERTLISKDI LYTLEQQTLI NQLESDLKSH MYDKNPKRFA HSISVGHCAE TLAQVYGADM FSARVAGILH DWEKLLSDAD TLELAERFRI QVEAPYQKIV GLLHGPLAAK TLPAIYPWLS NEILSAIQKH TAGDRQMSKL DKILYVADLI EPLRPNFTAV EESRNVYLRG GSLDELYESA FCNVMMYVIS SRRYLYPNSI ALYNEMIEKT SK
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