| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0612 |
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| Symbol | |
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| ID | 8413471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 684466 |
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| End bp | 685719 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645022189 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_003179633 |
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| Protein GI | 257784416 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.348525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAC TGGCAAGTGC TACCTCGCAG CCTCGAGCGC TGCTTGTTCT CGAAGATGGA
ACAACCTTTG AGGGGAGGTG CTGCGGTGCT AGCGGAGAGA CCTTCGGCGA GATTGTTTTT
AACACGTCTA TGACGGGCTA TCAGGAGATT ATCTCCGATC CAAGTTACGC CGGCCAGATT
GTCACGCTGA CCTATCCTCA GGTAGGCAAC TACGGCATTG ATCCTGCGGT TATGCAGCGA
GACACCCTGC ACCTACGCGG TTTTGTGGTG CACGATATGT GCTATGAACC AAGCAACTGG
ACTTCCAAGC AGAGTCTGCC TGAGTTCCTA CAGGAAAACG GCATTGTTAC CATTGAGGGT
ATTGACACTC GCGCGTTGAC CATGCACTTG CGTGACTTCG GTGCACAAAA GGCAGCCATT
TCCACCGAGG ACTTGGATTC CGCCCACCTG CTTGCACGTG TCCAGGCGTC GCCTCATATC
TCCGAGCACA ACTTTGTCCC CGACGTTTCC GTTACCGCTC CTTACGTGGT CCCTGCTACC
TCCAAGAAGC GCTTCAACGT TGTCGCTTAC GACTGTGGCG AGAAGAACGG TATTCTCCAG
GGTCTTGCGG CAAACGGCTG CGAGGTCACG GTTGTACCGT GGAATACACC TGCAGAGGAC
GCCTTGGCTT ACAACCCAGA CGGCATCTTC TTCTCCAATG GTCCTGGTGA TCCAGAGCAG
GTTGATGCTA CGCAGGAGGC TGCTCGCGGC GTTCTGGGTA AGGTTCCTGT CTTTGGTATC
TGCTTGGGTA ATCAGATGCT CTCTATTGTT GCAGGTGCAG ATATCGAGAA ACTCAAATTT
GGACACCACG GTGGCAATGA ACCAGTTATG AATCTTCTGA CAGGCAAGGT TGAGATTACT
GCTCAGAATC ACAACTACGG GCTGGTGTTC CCAAGTTTGG GCAAGCTTAT TGCAGAGGAG
TCCGGTGGAA TCTCCGAGCA TTTTGACAAC CTCTGTGAGT GGTCTGCAAG GCACATTGCT
CCTGTTGTGC AGACAAAGGA GTTTGGCCGC GTCCGACTCA CACACGTTAA CCTTAATGAC
GGAACTCCAG AGGGCATTCA GTTCCTGGAT ATCCCTGCAT TCTCCGTCCA GTATCATCCT
GAGGCAAACC CAGGACCTCA CGATTCATCC TACTTGTTCA AGGCATTTGC ACGTTTGATG
GAAAGACAGT CTGACTATCT TGCCATCGAC GTTCGTGAGG GGAGGCGCTT CTAA
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| Protein sequence | MNPLASATSQ PRALLVLEDG TTFEGRCCGA SGETFGEIVF NTSMTGYQEI ISDPSYAGQI
VTLTYPQVGN YGIDPAVMQR DTLHLRGFVV HDMCYEPSNW TSKQSLPEFL QENGIVTIEG
IDTRALTMHL RDFGAQKAAI STEDLDSAHL LARVQASPHI SEHNFVPDVS VTAPYVVPAT
SKKRFNVVAY DCGEKNGILQ GLAANGCEVT VVPWNTPAED ALAYNPDGIF FSNGPGDPEQ
VDATQEAARG VLGKVPVFGI CLGNQMLSIV AGADIEKLKF GHHGGNEPVM NLLTGKVEIT
AQNHNYGLVF PSLGKLIAEE SGGISEHFDN LCEWSARHIA PVVQTKEFGR VRLTHVNLND
GTPEGIQFLD IPAFSVQYHP EANPGPHDSS YLFKAFARLM ERQSDYLAID VREGRRF
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