| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0606 |
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| Symbol | |
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| ID | 8413463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 675690 |
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| End bp | 676529 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 645022181 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003179627 |
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| Protein GI | 257784410 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.980821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.149649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCG AAAAAATTAT TAATAGAGTT TTAGCCGTAT TTTTTACCAT TCTTTCTCTT
GCATGGATTT ATCCAATGGT TATGATTTTG ATGAATTCAT TTAAGCAAGA AACAACTATT
ACTACATCTA CAGCGTTTGA TTTAGTAACT TCAGAAAACT CTGCAGGTTT TGCTAACTAC
ATTGCTGCTT TAGAGAAGCA AGGCTTTTTA GCGGCCTTTG GCTATTCCTT GGTAATTACC
GTTACATCTG TAGTACTGAT TTTGGTTTGC TGCTCAATGT GTGCATGGTT TATTGTTCGT
GTAAAAGATC GCATGAGCAA CATTCTGTAT TACCTGTTTG TTTTCTCGAT GGTAGTGCCT
TTCCAGATGC TTATGTTTAC GCTATCCAAT ATGGCAAATA CGCTTGGATT TAATACTCCT
TTCAATATTT GCTTCATTTA CTTGGGTTTT GGTGCTGGAT TAGCAGTATT TATGTTTGCT
GGATTTGTTA AGACTATTCC GCTTGAGATT GAGGAAGCCG CTACTATTGA TGGCTGTAAT
CCACTCCAGA CGTTCTTCCA TGTTGTCTTG CCTATTATGA AACCAACATA CATTTCTGTT
GGTATTCTCG AAACCATGTG GGTTTGGAAT GACTATTTGC TTCCATATCT TGTATTGGAT
AGAACCAAAT ATCAAACCAT TCCAATTTTG ATTCAGTACT TTAGAGGTGG ATATGGACAC
GTAGAGATGG GTCCAATGTT TGCCTGCATC ATGATGGTTA TTATCCCAAT CGTCATTATG
TATTTGTTGT GCCAGCGTTA CATCATTAAT GGTGTTATTT CTGGTGCTGT AAAAGGCTAA
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| Protein sequence | MKREKIINRV LAVFFTILSL AWIYPMVMIL MNSFKQETTI TTSTAFDLVT SENSAGFANY
IAALEKQGFL AAFGYSLVIT VTSVVLILVC CSMCAWFIVR VKDRMSNILY YLFVFSMVVP
FQMLMFTLSN MANTLGFNTP FNICFIYLGF GAGLAVFMFA GFVKTIPLEI EEAATIDGCN
PLQTFFHVVL PIMKPTYISV GILETMWVWN DYLLPYLVLD RTKYQTIPIL IQYFRGGYGH
VEMGPMFACI MMVIIPIVIM YLLCQRYIIN GVISGAVKG
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