Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0542 |
Symbol | |
ID | 8413396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 628853 |
End bp | 629875 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645022115 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_003179564 |
Protein GI | 257784347 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.15882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000411486 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTTTG ATCCCAACGG TAAGGTTGTT GCAATTCTTG GTGCTACTGG TGTTGTTGGC GCTCAGATGA TGCAGTGCCT TGAAGAGCGT AATTTTCCTA TTAAGGAGCT GGTGCTCTTA GCGTCTGCTC GAAGTGCAGG CAAAACTATC AACTTTATTG GTCAGCAGAT TGTTATCCGT GAGGCAACTC CCGAGGCTTT TGAGGGAGTT GACATTGTTC TTGGAGCGGC CGGTGACGAG CAGGCAAAAG AGTTGCTCCC TGAAGCAGTT AAGCGCGGGT GCGTCTGTGT TGACAATTCC CATGCGTTCA GAATGGATCC CGATGTTCCG CTGGTAATTC CAGAGATTAA TGCCGAAGAC ATCAAGGGAC ATAACGGCAT CATTTCTAAT CCAAATTGTG CAACCATTAT TGGCCTGGTA CCTCTGTATC CTCTACATAA AGTAGCAGGT GCTAAACGTA TTATTGCTTC TACATATCAA GCTGCATCAG GTGCCGGTCT TCCTGGTCTT ACTAGCTTGA AGAACCAGAT GGCTGACGTT GTTGCAGGCA GGAAAGTAAC CGAGACCACT CCTTTTGCAT ACCAGCTGGC AGTCAACCTG ATTCCACAGA TTGGTGGCTT TGATGAGGTT GGCTACACCT CCGAGGAAAT GAAGATGCAA AACGAGGGAC GTAAGATTAT GCATCTTCCT GAACTGCGCG TTAATTGTAC TTGCGTCCGC GTTCCAATAA TGCGCTCTCA CTCCGAATCC ATCACTGTTG AGTTTGAGCG TCCTTTGAGC CCAAATGAAG CTCGAGCTAT TCTTGAGGAT GCACCGGGTA TCAAGGTTGT GGACAATCCT GCAGAGCTTC AGTACCCGAT GCCTCTTGAT ACCTCCGATC AAGATCTTAT TTATGTTGGA CGTATTCGAG AGGACCTCTC TGCTGATAAG AACACCAATG CATTGACGTT TTTCTGCTGC GGTGACCAGA TTAGAAAGGG CGCCGCAACT AATGCTGTCC AGATTGCAGA GTATCTGCTG TAA
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Protein sequence | MAFDPNGKVV AILGATGVVG AQMMQCLEER NFPIKELVLL ASARSAGKTI NFIGQQIVIR EATPEAFEGV DIVLGAAGDE QAKELLPEAV KRGCVCVDNS HAFRMDPDVP LVIPEINAED IKGHNGIISN PNCATIIGLV PLYPLHKVAG AKRIIASTYQ AASGAGLPGL TSLKNQMADV VAGRKVTETT PFAYQLAVNL IPQIGGFDEV GYTSEEMKMQ NEGRKIMHLP ELRVNCTCVR VPIMRSHSES ITVEFERPLS PNEARAILED APGIKVVDNP AELQYPMPLD TSDQDLIYVG RIREDLSADK NTNALTFFCC GDQIRKGAAT NAVQIAEYLL
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