| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0534 |
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| Symbol | |
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| ID | 8413388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 619885 |
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| End bp | 620757 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022107 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003179556 |
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| Protein GI | 257784339 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000179103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTTTTAA CTCAGGTGCT CAATGGACTT CAATTGGGCA GTATTTATGC ACTGGTGGCG
CTTGGTTACA CAATGGTGTA CGGCATCATC TTGCTTCTTA ACTTTGCACA TGGTGACATC
ATCATGTTTG GTTCCTACGT TGCATGGATT GCTCTTGTTC AGCTAGGACT TAATCCAGCA
ATCGCTGTTC TTCTCGCCAT TTTTGGTTGT GTTGTATTGG GTGTCCTTAT TGATAAGGTT
GCATACGCAC CACTCAGAGA AGCTCCAAGG CTTTCTATTC TGATTACTGC AATTGGTGTT
TCTTATTTGC TCGAGAATGG CGTTCAGTTG CTTCTTGGCG CTGATGCTAA GGTTATTCCA
AACATCATCG ACCTGGGAAC CGTTCAGGTA TTTGGCTCAA CGCTTTCTGG TACTGCACTT
TTAACAGTTG CTGTCACTAC TTTAGCAACC GTTGCCCTGA CCGTTTTGGT TCAGAAGACT
CGTCTTGGTA AGGCAATGCG CGCCGTTTCG GAGGACATGG GTGCTGCTCG CCTGATGGGC
GTTAATGTCA ACAGTACTAT CAGCTTTACC TTTGCGGTTG GTTCTGCGCT TGCAGGTATT
GCTGCAATCT TGTATTCAAT GGCATATCAG CAGGTTTCTC CAACCATGGG CGTTATGTTG
GGAACTAAGG CATTTGTTGC AGCGGTTCTC GGCGGTATTG GCTCTATTCC AGGTGCTGTT
ATTGGTGGTC TTATTGTTGG CTTTTCCGAG GTCTTTGTTG CTGCCTTTGG CTTGTCTGTT
TGGCAGGACG CAGTAGTCTT CTTACTCTTG ATTCTTGTTC TTGTTGTCAA ACCAACTGGC
TTGCTTGGTC GACCAGTTAC TGAGAAAGTG TAA
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| Protein sequence | MFLTQVLNGL QLGSIYALVA LGYTMVYGII LLLNFAHGDI IMFGSYVAWI ALVQLGLNPA
IAVLLAIFGC VVLGVLIDKV AYAPLREAPR LSILITAIGV SYLLENGVQL LLGADAKVIP
NIIDLGTVQV FGSTLSGTAL LTVAVTTLAT VALTVLVQKT RLGKAMRAVS EDMGAARLMG
VNVNSTISFT FAVGSALAGI AAILYSMAYQ QVSPTMGVML GTKAFVAAVL GGIGSIPGAV
IGGLIVGFSE VFVAAFGLSV WQDAVVFLLL ILVLVVKPTG LLGRPVTEKV
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