| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0465 |
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| Symbol | |
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| ID | 8413314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 534848 |
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| End bp | 535663 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022033 |
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| Product | phosphotransferase system PTS sorbose-specific IIC subunit |
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| Protein accession | YP_003179487 |
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| Protein GI | 257784270 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000677014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTA TCACAATACT GCTTGTCGTA ATTGTTGCGC TTCTTGCTGG CATGGAAGGC
ATCCTTGACC AGTGGGAGTT CCACCAGCCC CTGGTTGCTT GCTCACTGAT TGGCCTTGTG
ACTGGTCACC CTGCTGAGGG AATTATCCTC GGCGGTTCTC TTCAGATGAT TGCTCTTGGT
TGGGCAAACA TTGGAGCTGC AGTTGCACCA GATGCAGCTT TGGCATCTGT CGCATCTGCA
ATTATTATGG TTCTGGCACT GAACGGTGGA GATACTGATA CCACTGCTGC TATTAACACT
TCTATTGCAC TTGCAATTCC TCTGTCTGTA GCAGGTCTGT TCCTTACCAT GATTGCTCGT
ACTATTGCAA CCGGTATTGT TCATGCAATG GATGCAGCTG CCGAGAAGGG CGATTTTGCT
GCAATTGAGC GTTGGCACAT TGTAGCTATT TTTATGCAGG GTGCTCGTAT TGCTGTCCCT
GCAGCTGCTC TTTGCTTCAT TGACCCAGCT ATCGTCACTG ATGCTCTAAA CGCAATGCCT
AAGTGGCTTA CTGGCGGCAT GGCAGTTGGC GGTGGTATGG TTGCTGCTGT TGGTTATGCA
ATGGTTATCA ACATGATGGC TACTCGTGAG GTTTGGCCAT TCTTTGCATT GGGCTTCGTC
TTTGCGGCTA TTAATCAGCT CACCCTTATT GCTCTTGGTG TTATTGGTGT TTGCCTTGCA
ATTATTTACC TTGGTCTTAA AGATCTTGCT AAGCAGGGCG GCGGCGCAGG TGGTGGGTCT
GGCGATCCAC TCGGCGATAT TATCGACAAC TACTAA
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| Protein sequence | MTPITILLVV IVALLAGMEG ILDQWEFHQP LVACSLIGLV TGHPAEGIIL GGSLQMIALG
WANIGAAVAP DAALASVASA IIMVLALNGG DTDTTAAINT SIALAIPLSV AGLFLTMIAR
TIATGIVHAM DAAAEKGDFA AIERWHIVAI FMQGARIAVP AAALCFIDPA IVTDALNAMP
KWLTGGMAVG GGMVAAVGYA MVINMMATRE VWPFFALGFV FAAINQLTLI ALGVIGVCLA
IIYLGLKDLA KQGGGAGGGS GDPLGDIIDN Y
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