| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0457 |
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| Symbol | |
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| ID | 8413306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 525684 |
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| End bp | 528329 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022025 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003179479 |
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| Protein GI | 257784262 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACT ATAAAACAAT GACAACAGCA GAGATTCGTG AGGACTTCCT GAGCTTTTTT
GAGAGCAAAG GTTGTAAGCG TTATCCTTCT TCATCTCTGG TGCCTTCTGA CCCTTCACTG
CTCCTTGCTA ACGCTGGTAT GAATCAGTTT AAGGAGTATT ACCAGGGTAT CAAGACTATG
AAGGAGATTG GCGCTACATC CTGCCAGAAG TGTCTTCGTA CTAACGATAT TGATAACATT
GGCGACTCCC GTCACCTTTC ATTCTTTGAA ATGCTGGGCA ACTTCTCCTT TGGTGGTTAT
ACCAAGCGCG ATGCATGTAC CTGGGCAATG GAGTTTATTT CTTCTCCAGA GCACCTTGGT
CTGCCACTTG ATCGCCTGTA CTTTACCGTT TTTACTGATG ACGATGAGGC AATTGAGATT
TGGAAGTCTC TTGGCATAAC AGAAGATCAC ATCACCCGTC TGGGCGAGGA GGACAACTTC
TGGGCAGCTG GTCCAACTGG TCCTTGTGGT CCTTGCTCTG AGATTTATTT TGATCAAGGC
CCTGAGTTTG AGGGAGAAGC GCCTGGAGAT GATGGTGACC GCTACCTTGA GTTCTGGAAC
CTCGTCTTCA CTCAGTTTGA CCGTCAGGAA GATGGCTCTC TGCCTGAGCT TCCTCATCGC
AACATCGATA CCGGCATGGG TCTTGAGCGT ATTGCAGCTA TCATGCAGCA TGAGGGAACC
AACTACGAGG GTGACATTAT GCGTACCCTC ATCTCTTTGG GCGAGAAACT CTCTGGCAAG
AAGTATCACT CAACTGACGA GATTGATCGC AGTCTGCGTA TTCTTGCAGA CCACTCCCGT
GCAGTTACTT TTATGATTGG TGACGGCATT CTTCCTGGTA ATGAGGGCAG AAGCTACATT
CTTCGCCGTC TGCTTCGTCG TGCTGTCTAC CACGGTCGTT TGTTGGGTAT TCAGGGTACT
TTTATGGCGG AGTACGCGCA TGAGGTTGCT GTTTTGCTTG GTGCAGAGTA TCCAGAACTT
GTCGAGAAGA GCGCTCTTAT CGATGGCATT TTAACTGCAG AAGAGGAGCG CTTTGGCGCT
ACGCTTGACG CTGGCGAGTC CAAGCTCACT GCTGAGCTTG AGCAGCTTGA GGATGGTGCA
CAACTTTCTG GTGAGGTTGC ATTCCTCCTG CACGATACCT ACGGATTCCC CATTGATCTT
ACTCGTGAGA TTGCAGCAAA TGCAGGTCAC GTTGTTGATA TGGATGCATT TGATGCTGCA
ATGACCGAGC AGCGCGAGCG CGCTCGTAAG TCTGCTAACC GCGATGCCTG GGGTAATGCT
CAAAGCATCT GGGTGGCACT TTCTGACCGC CTTGATGAGA CCGTTTTTGA CGGCTACGAC
AATAATGAGC TTTCCGGTGT TCGTGTTGTT GCTCTTGTTC AGGACGGGCA GGAGGTTGAG
TCCGCCACTG TTGGCTCCGA GGTAGAAGTT GTACTTGACC GCACACCTTT CTACGCAGAG
ATGGGTGGTC AGGTTGGTGA CACTGGTAGG CTCAGTGGTC CTGGTCTTTA TGTTCACGTC
ACTGATACCA AGCACCGTGA CGGCGGCCTT GAGTCCCACA TTGGTGTAGT AGAGGAGGGT
ACGCTCTCTA TTGGTGATTC TGTTACCGCA ACTATTGACG CTGGTCGTCG TGAGCTTATT
CGTCGCAACC ACACAGCAAC TCACCTCCTT GATGCAGCGC TTAAGAAGGT TTTGGGAGAC
CACGTTAACC AAGCTGGTTC TCTTGTTGCC CCAGATCGTA TGCGTTTTGA CTTTACGCAC
TTTGAGGCTC TTACTAAAGA TGAGCTTGAT CGTATTGAGG GCATGGTAAA TGCAGAGATC
TTTGCCGCTA AGCCTATTGT TACTAAGATT ATGAGCATTG AAGACGCAAA GGCAGCTGGT
GCTGTTGCAC TCTTTGGCGA GAAATACGGT GATGTCGTAC GTGTTGTTTC TGCTGGCACA
GAAGACACTC CATTCTCTCG CGAGCTTTGC GGTGGTACTC ATGCACGCAA CACTGCAGAC
CTTGGCCTCT TCAAGATTAT TTCTGAGAGC TCCGTTGGTT CTAACTCAAG GCGTATTGAG
GCTGTAACCT CTATGGGCGC TATTGAGTAC GTTGATGAGC GCCTGGCTCA GCTTGATGAG
GTTGCTGCAG CTCTGAAGGT CCGTCCTTCC GCTGTTGCAG ACCGTGTTGA GCAGCTGCAG
CAAGATCTTC GCGCTGCTAA TCATAAGCTT GAGGCCGCTC TTACTGGAGC AGGTAGCAAT
CAGGTAGCAG AAGCACTTAA GTCTGCTGTT CAGCTTAACG GTTACAGCTG CGTCATCGCT
AAGCTTGAAG GTCTTTCTGG TAAGGAGCTC CGCTCTGCAT GGGATGGCAT ACGTGATGCA
TCTGACGGTC AGCCTGTTGC TTGCGTTATC GCATCCGCAA CTGCTGACGG TAAGGTTTCT
CTGCTTGCAG GTGCAACTGA TTCTGCAGTT GCAGCGGGAT TCTCGGCAGG AGACATTGTA
AAAGAGATTG CAGAGTTTGT TGGTGGCCGC GGTGGCGGCA AGCCAGCGAT GGCGCAGGCA
GGCGGCTCAA ATGCCGCTGG AATTGATGCT GCACTTGATG CTGCAAGAAC AAAGCTTGGT
GCATAA
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| Protein sequence | MADYKTMTTA EIREDFLSFF ESKGCKRYPS SSLVPSDPSL LLANAGMNQF KEYYQGIKTM
KEIGATSCQK CLRTNDIDNI GDSRHLSFFE MLGNFSFGGY TKRDACTWAM EFISSPEHLG
LPLDRLYFTV FTDDDEAIEI WKSLGITEDH ITRLGEEDNF WAAGPTGPCG PCSEIYFDQG
PEFEGEAPGD DGDRYLEFWN LVFTQFDRQE DGSLPELPHR NIDTGMGLER IAAIMQHEGT
NYEGDIMRTL ISLGEKLSGK KYHSTDEIDR SLRILADHSR AVTFMIGDGI LPGNEGRSYI
LRRLLRRAVY HGRLLGIQGT FMAEYAHEVA VLLGAEYPEL VEKSALIDGI LTAEEERFGA
TLDAGESKLT AELEQLEDGA QLSGEVAFLL HDTYGFPIDL TREIAANAGH VVDMDAFDAA
MTEQRERARK SANRDAWGNA QSIWVALSDR LDETVFDGYD NNELSGVRVV ALVQDGQEVE
SATVGSEVEV VLDRTPFYAE MGGQVGDTGR LSGPGLYVHV TDTKHRDGGL ESHIGVVEEG
TLSIGDSVTA TIDAGRRELI RRNHTATHLL DAALKKVLGD HVNQAGSLVA PDRMRFDFTH
FEALTKDELD RIEGMVNAEI FAAKPIVTKI MSIEDAKAAG AVALFGEKYG DVVRVVSAGT
EDTPFSRELC GGTHARNTAD LGLFKIISES SVGSNSRRIE AVTSMGAIEY VDERLAQLDE
VAAALKVRPS AVADRVEQLQ QDLRAANHKL EAALTGAGSN QVAEALKSAV QLNGYSCVIA
KLEGLSGKEL RSAWDGIRDA SDGQPVACVI ASATADGKVS LLAGATDSAV AAGFSAGDIV
KEIAEFVGGR GGGKPAMAQA GGSNAAGIDA ALDAARTKLG A
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