| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0426 |
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| Symbol | gpmA |
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| ID | 8413275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 493285 |
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| End bp | 494046 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021994 |
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| Product | phosphoglyceromutase |
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| Protein accession | YP_003179448 |
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| Protein GI | 257784231 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0588] Phosphoglycerate mutase 1 |
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| TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG ATCAGTACAT GCACCTTGTT ATTGTTCGCC ATGGTGAGTC TGAGTGGAAC
AAGCTCAACC TATTCACCGG TTGGACCGAC GTTGACCTTA CCGAGACTGG TCATGAGGAA
GCAACAGCTG GCGGTCGCGC TCTTAAAGAG GCTGGCTACG ACTTTGATGT TTGCTACACT
TCCCTACTCA AGCGTGCTAT TCACACTCTG AATCATGTTC TTGATGAGCT TGATCGCAAT
TGGCTTCCTG TTCATAAGAC TTGGCGTCTC AATGAGCGTC ACTACGGCGC TCTGCAGGGT
CTTAACAAGG CTGATGCTGC TAAGGAGCAT GGCGAGGATC AGGTAAAGAT TTGGCGTCGC
TCCTTTGATG TACAGCCACC AGCTCTTGAG CCAGGTGACG AGCGTGATCC TCACATTCAA
GAGATGTTCC GCGATGTCCC AGCAGAGGAC CTTCCATACA CAGAGTGCCT GAAGGACACC
ATTGCACGCG CATGGCCTTA CTTTGAGCAG GAGATTAAGC CACAACTTGA GGCTGGCAAG
CGTGTTCTCA TTGCTGCACA CGGCAATAGC CTTCGTGCTC TTGTTATGCA GTTTGAGCAC
CTCACTCCAG AAGAGATTCT TGAGGTCAAC ATCCCAACCG GCATTCCTTG CGCATATACC
TTTGATAAGG ACTGGAACAT TGTTGACAAG CACTATATTG GCGATCCAGC AGTTATTGAA
GCAAAGATTA ACGCTGTTGC TAACCAGGGC AAAGCTAAAT AA
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| Protein sequence | MAEDQYMHLV IVRHGESEWN KLNLFTGWTD VDLTETGHEE ATAGGRALKE AGYDFDVCYT
SLLKRAIHTL NHVLDELDRN WLPVHKTWRL NERHYGALQG LNKADAAKEH GEDQVKIWRR
SFDVQPPALE PGDERDPHIQ EMFRDVPAED LPYTECLKDT IARAWPYFEQ EIKPQLEAGK
RVLIAAHGNS LRALVMQFEH LTPEEILEVN IPTGIPCAYT FDKDWNIVDK HYIGDPAVIE
AKINAVANQG KAK
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