| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0425 |
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| Symbol | |
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| ID | 8413274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 491653 |
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| End bp | 493110 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645021993 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003179447 |
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| Protein GI | 257784230 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAC GAAAGCTCAA TACAAAACTT GTTCTTTCTG TAATTGCAAC AGGAATTATG
TCCTTCTCGG GAGTTGTCGT AGAAACTGCC ATGAACGTGA CGTTTCCGAC ATTGATGGAA
GAATTTTCTA TTGGTACCTC AACAGTACAG TGGATGACCA CATCGTACCT TTTGATTCTT
GCCATCATCA TGCCTATGTC ATCATTTTTA AATAGACGGT TCAAAACTAA AAGTATTTTT
ACCGTAGCCA TGATCTTCTA TATCAGCGGC ATTCTCTGCG GATTTGCTGC TCCAACGTTT
ATGTTATTGC TGCTTGGCCG CATTTTAGAA GGAATTGGCA CCGGTCTAGC GCTGCCCCTG
ATGTTCAACA TCATTACCGA GCAGGCTCCA CTTAAAAATA TGGGCGTCAT GATGGGCATT
GGTATGCTTG TTACCGCCGT TGCTCCTGCA GTAGGGCCTT CAGCTGGTGG CTGGATTGCA
GAACATCTTG GTTGGCGAAT GATTTTTGCC GGTCTTCTTC CCTTCTTGAT TGTAGCGTTT
GTGCTGGGAA TCAGTTCAAT CCAACAGAGC CATGAGACTG AAGTTATTTC TTTTGATGTC
TTTGGCTGGC TACTTCTTAC CGTAAGTTTT ATTGCGCTTA TCTTTGTTAT TGACGAGTCC
GGCGCGTTTG GTCTTCTTAG CATTCCTGTT TTGCTTGCAA TGGTAATTTT TGCTGGATCA
CTCGCGCTCT TTATACGCCA CGAGAACTCG CTTAAATCTC TAACTAAATC ATTGCCTAAC
AAAATGCAAT CCTCTAAACA ATCTCCTAAA ATTCCTCTCA TTGACCTTGC CGTATTTAGC
GAGAAAGCCT TTGTACTTTC ACTTTTTGCC ATTATTGCTC TACAGTTTAT TATTCTTGGT
CAATCCTATC TTTTACCTAA TTTTTCTCAA CTCACTCTAG GAGCAGGTGC TACTGTCGCA
GGAGCACAAA TGCTTCCAGG ATGCGCAATT GGTGCAGTTA TGGCGCCTAT TTCTGGTCAG
ATATTCGATA AACTAGGGGC TCGCAAACCT ATCATGACAG GCATACTTTT CTGTCTTATT
AGCGAGATCC TTTTCTTAGC GTTTACTCCC CTGCTCACGG TAGAACTAAT TGCTTGTATT
TTTTGTATCT TTACCATAGG TCAAGCATTA CAGATAGGAA ATAACTTTAC CGTTGCGCTC
AAGCACCTAC CAGAGAACTT AAAGGCAGAC GGCAATGCTG TAATCAATAC TATGCAGCAG
CTCTTTGGTG CACTAGGCAC CAGTATTATT TCTGGCATTG TAGCCGCATC ACAACTTGGC
ACCTCTGACA TAGCAACAAG TACCCTTGCA GGAGCTCAAA ATGCACTCTT TGTACTCGTA
TGCGTAGCTT GTATTCCTCT TGTTACTATG GGAATAGTAT TATTTGTACT TCCTCGTAAA
GAAAATATAA AAAAGTAA
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| Protein sequence | MFERKLNTKL VLSVIATGIM SFSGVVVETA MNVTFPTLME EFSIGTSTVQ WMTTSYLLIL
AIIMPMSSFL NRRFKTKSIF TVAMIFYISG ILCGFAAPTF MLLLLGRILE GIGTGLALPL
MFNIITEQAP LKNMGVMMGI GMLVTAVAPA VGPSAGGWIA EHLGWRMIFA GLLPFLIVAF
VLGISSIQQS HETEVISFDV FGWLLLTVSF IALIFVIDES GAFGLLSIPV LLAMVIFAGS
LALFIRHENS LKSLTKSLPN KMQSSKQSPK IPLIDLAVFS EKAFVLSLFA IIALQFIILG
QSYLLPNFSQ LTLGAGATVA GAQMLPGCAI GAVMAPISGQ IFDKLGARKP IMTGILFCLI
SEILFLAFTP LLTVELIACI FCIFTIGQAL QIGNNFTVAL KHLPENLKAD GNAVINTMQQ
LFGALGTSII SGIVAASQLG TSDIATSTLA GAQNALFVLV CVACIPLVTM GIVLFVLPRK
ENIKK
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