| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0413 |
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| Symbol | |
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| ID | 8413262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 476774 |
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| End bp | 478741 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 645021981 |
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| Product | Glucan-binding protein C |
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| Protein accession | YP_003179435 |
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| Protein GI | 257784218 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGGG TCTCAACCTC TTCTTTTACG AGAGTAGCTG CAGTGTCATT ATCTCTTCTT
TTGATATTGA CTCTTTTTCC TCTTAATCCT GTAAAAGCTT ATGCAACAGA TCCTGCAAAA
GGTATAGAGG TTCGTGAAGA TGCTTCTAAA TTAGAGGCGA GTGTTGCAGC AGCAAAGGCA
GCTGGTGTAG ATGTTCAAAA AGATGATGAT GTTGACAAGG GTTCTGTCGA ATCGTCATCA
GATATTGATG CTAAAAAGTC TGAGATTCAA GATGATTACA ACAAACAATC TCAAGATTTA
GATGCTATTA CAGAAGAAGC TAAACAGAAG CTAGCAGACT ATGCTACAAA AAAGGCTGCT
TATGATACCG CCAAGGCTAA GTATGACGCA GACAAAGCTC AGTATGATGC AGACAAAGCT
CAGTATGATG CAGATATGAT TGCTTATAAT AAAGCTATGG CTGAGCTTGA ACAGAAAAAG
AACGAAGATG GCTATATGAC TAAGCCATAT CCGCAGCTTT TAACATTTAA ATCTGAGCCA
AATGCAGTAC TTACTCTTTC AGGCAGAAAA TATACACATG ATGAGTTTAG TGCAGAAGTT
AGATCTTGGA ATCTTGGATC TGAGCCATGG AGATATTCAT ACTTTGATGC ATTAAATAAT
GGACAGGCTG CTAATGCAGC ACGTGTTATG TTAGAAAAAG ATAAGCCTTT CACTGCTACA
TATACAAATT TGACTAATTC TAGCTATAAC GGTAAGAAGA TTTCTAAAGT TGTATATACC
TATACGTATA AGGGTTCTTC GGGAGTAAAC GTACCTAATA AGCTTCCAGT TGTCTTGCAA
AAGGACCCTA CGGTTACTAT TTGGTATAAC GATTTCTTCG GTGATGCTCG AATTAATGTA
ACTGTTAAAT TTTATGATGA AGACGGTAAT GTAATTGACC CAACTGGTTC ATTACTGAGT
TTTTCTTCAT TAAATAGAGG AAATGGATCC GGTGCAGTTG ATAAAGATGC AATTGAAAAG
GTTGGATACT TTAACGGCGA ATATGTGCCT ATTTCAGGAT CAACAATTAA ACCCCATGCT
GATGGCAGCG CGTATTCAGA TACAAATAAT GCTGAAAAAG CTTATGGTTC CAGATTTAAT
ACAGCTGACT GGGATACACC AACTTCTCCT AAAGCATGGT ATGGTGCCAT TGTTGGCCGA
GTAACAAGTC CTGAAATTAG TTTTGATATG GCCTCTCATA AGAGCGGCAT TGTTTGGTTT
GCTCTCAATT CGGATATTAA GGCAATTAAT GTGCCCACCA AACCAGTTGA GCCAACACCA
CCTACACCTC CAGCAGAAGA GCCTGAGAAG CCAACATTTA GCGCTCGATA TCATTTGGAC
GTATTCTATG TAAAGCCTCA GTTAGAGAAG AAAGCATTAA GTGAGGATGA TAAGGATATT
AATTCCAATA CAGTAAAGAC TAATTCTGTT GTCAAATTTG CATTGAATAC TACGCCTTTT
CCAGCAGGGC ATGAAAAAAT TGACTCTGTA GTTTTCCATG ATGTATTACC CGAGGGTTAT
GAAGTCAATT TGGAAGACAC AAAGAAGGCA AGTCCTGATT ATGAAGTAAG TTACGATGAA
GGTACGCGTA CGCTTGTCTT TACAGCAAAT GCTTCTTTGC TCAGTCAGAT TAATGCTGAT
CCAACTAAGG AAGCTGATGT TCCTGCTCCT GTAATCGTTG GTAAAGTTAC AAAAGATGGA
GCTGTTTACG AAAACGACTT TGATATAGAT ATTAATAATA CCTATACAAG AAGCTCAAAT
AAGGTAACGG TAAAGACACC TGAGCCTCCT AATCCGCCAA AGAAACGTAA AAAGAAGGCT
AAAACTCCAT ATACAGGAGA CGCAGGAGTA TTTTCTTCTA TTGCTCTTTG TACAGGATCA
ATAGCAGTAT TAGGTGGTTC TTGGTTTATT AAGAAGAAAA AGAAATAG
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| Protein sequence | MKRVSTSSFT RVAAVSLSLL LILTLFPLNP VKAYATDPAK GIEVREDASK LEASVAAAKA
AGVDVQKDDD VDKGSVESSS DIDAKKSEIQ DDYNKQSQDL DAITEEAKQK LADYATKKAA
YDTAKAKYDA DKAQYDADKA QYDADMIAYN KAMAELEQKK NEDGYMTKPY PQLLTFKSEP
NAVLTLSGRK YTHDEFSAEV RSWNLGSEPW RYSYFDALNN GQAANAARVM LEKDKPFTAT
YTNLTNSSYN GKKISKVVYT YTYKGSSGVN VPNKLPVVLQ KDPTVTIWYN DFFGDARINV
TVKFYDEDGN VIDPTGSLLS FSSLNRGNGS GAVDKDAIEK VGYFNGEYVP ISGSTIKPHA
DGSAYSDTNN AEKAYGSRFN TADWDTPTSP KAWYGAIVGR VTSPEISFDM ASHKSGIVWF
ALNSDIKAIN VPTKPVEPTP PTPPAEEPEK PTFSARYHLD VFYVKPQLEK KALSEDDKDI
NSNTVKTNSV VKFALNTTPF PAGHEKIDSV VFHDVLPEGY EVNLEDTKKA SPDYEVSYDE
GTRTLVFTAN ASLLSQINAD PTKEADVPAP VIVGKVTKDG AVYENDFDID INNTYTRSSN
KVTVKTPEPP NPPKKRKKKA KTPYTGDAGV FSSIALCTGS IAVLGGSWFI KKKKK
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