| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0402 |
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| Symbol | |
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| ID | 8413251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 464120 |
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| End bp | 464887 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021970 |
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| Product | FeS assembly ATPase SufC |
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| Protein accession | YP_003179424 |
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| Protein GI | 257784207 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
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| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000798388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTG AGCTACTCCG TGTAAACGGA ATTTCCGCAG GTACCGAGGA GAAATCCATC
CTGCATTCAA TTGATTTGAG CATTGGTGAT GGCCAGGCTC ATGTTCTGAT GGGACCTAAC
GGCGCAGGTA AATCGACACT TGGCCGTGTC ATTATGGGTG ACCCTACCTA TAAGATTACA
GATGGTTCCC TTATCTTTAA CGGCGAAGAT GTAACTGAAC TTGCTGCAGA TAAGCGCTCC
CTTGCAGGCA TCTTCCTCTC CTATCAGGCA CCTGTTGAGG TTCCTGGTGT TCCTCTTTAT
TCATTCCTGC GTACCATTAC TCAGATGCGC CCCGAGCTTA AGATGACCGC TCGTCAGTTC
CGTCAGCGCG TTGGTCAAAT TTCTGATCAG CTTGAGCTTG ACCAGGGCTT CTTGATGCGT
GAACTTAACG TTGGCTTCTC TGGTGGCGAG AAGAAAAAGG TTGAGATGCT CCAGCTTCTA
TTGCTTCAGC CTAAACTTGC CATTCTCGAC GAGACTGACT CTGGTCTGGA TGTTGACGCA
CTATCCGTTG TTTCAAAAGG TATCCAGGCA TACCGTGAAA CCTGCGACGG ATCGCTGCTC
ATCATTACTC ACAACACTCG CATTCTTGAG CGCCTTGAGA TTGACCGCAC TCACGTTATG
GTTAAGGGTC ACCTGGTAGC TGACGGTCCC GCGGATCTCA TCAACCAAAT TGATCACGAG
GGCTTTGAGC ATTTTGAGAA CCAAACAGAT GAGGGTGGTG CTAACTAG
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| Protein sequence | MATELLRVNG ISAGTEEKSI LHSIDLSIGD GQAHVLMGPN GAGKSTLGRV IMGDPTYKIT
DGSLIFNGED VTELAADKRS LAGIFLSYQA PVEVPGVPLY SFLRTITQMR PELKMTARQF
RQRVGQISDQ LELDQGFLMR ELNVGFSGGE KKKVEMLQLL LLQPKLAILD ETDSGLDVDA
LSVVSKGIQA YRETCDGSLL IITHNTRILE RLEIDRTHVM VKGHLVADGP ADLINQIDHE
GFEHFENQTD EGGAN
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