Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0391 |
Symbol | |
ID | 8413240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 452514 |
End bp | 453287 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645021959 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003179413 |
Protein GI | 257784196 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TTTCTCAGTT TGCACTACAA GTCATATCCC TTACTTCTTT TCTTGCACTT TGGCAGCTTG TTATTGTTGT GGGAATTATT CCAAATTATC TAGTCCCAAC TCCTATTCAG GTTGTATTTG CGCTGGTTAA GGATTTTCAG CTTCTTATGA CACACACAGG AATCACGCTT CTAGAATCCT TTGTTGGTCT TGCTATTGGC GTACTTATCG GCTTCTTGCT TGCGGTCTTT ATGGACTTCT TCAAAACGCT GGACAAATTA CTTTCTCCAC TTATCACCAT TTCACAGACT ATTCCTGTTG TGACCATTGC CCCGCTTCTG GTGCTCTGGT TGGGATACGG TCTTTTGCCC AAGATTGTTC TTGTAGCTAT TTCAACGTTT TTCCCTATTA CCGTGGCATT GAACTCAGCA TTTAAAGCGA TTGATCCTGA TATGGTTGAT CTGATGACCA CCATGGGAGC CACTCGTATG CAGGTTTTTT GGCACGTCAA GTTGGCAGCT GCTGCACCAC AGTTTTTCTC GGGGCTAAAA ATGAGTGTGA CTTACGCCGT AATTGGTGCA GTAATCGCAG AATGGCTGGG AGGCGATGCT GGTCTTGGCG TCTACATGAC GCGCGTTAGA AAGGCGTTTG CCTACGACAG GATGTTTGCG GCAATCGTGG TGGTTTCTGC ATTGTCGCTG GTGTTGATGA AGCTTGTAGA GCTTATTCAA AAGTGTGCGC TTCCTTGGGA TACGTCTCAA AACGTCAAAG AATCTGCAAA ATAG
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Protein sequence | MKKLSQFALQ VISLTSFLAL WQLVIVVGII PNYLVPTPIQ VVFALVKDFQ LLMTHTGITL LESFVGLAIG VLIGFLLAVF MDFFKTLDKL LSPLITISQT IPVVTIAPLL VLWLGYGLLP KIVLVAISTF FPITVALNSA FKAIDPDMVD LMTTMGATRM QVFWHVKLAA AAPQFFSGLK MSVTYAVIGA VIAEWLGGDA GLGVYMTRVR KAFAYDRMFA AIVVVSALSL VLMKLVELIQ KCALPWDTSQ NVKESAK
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