Gene Apar_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0390 
Symbol 
ID8413239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp451397 
End bp452161 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content43% 
IMG OID645021958 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003179412 
Protein GI257784195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTCA AAGCTGATAA AAAAGTAATC GTCGAGCGTA ATAACAAGGT TGTGTATGAC 
AACGGAGACA CAGTCGTTAA GGTGTTCAGC GGAAGCAAAC CTTCTGCTGA TATTTTGAAT
GAGGCTTTAA ACCTCACTCG TGCTGAGCAG GCCGGTATTA ACGTTCCATC TCTTGTAGAG
ATTAGTAAGG TTGGTAATTG CTGGGCCATT TCAACTAGAA AAGTTGAGGG TAAAACAATA
AGGCAGCTTA TTGAAGAGCA TCCAGAAAAA GAGGATGAGT ATCTCAATAA GTTTGTTAAT
ATCGAGCTGG CTATTCATGC ACATAAAGCA CCACTTCTGA CTCGTCAAAA AGATAAGTTC
ACCCGAATGA TTAACAGCAT TCCAGACATT CTTGATGAGG CTACAAGGTA TGAGCTCCTG
CTTAAGCTTG ATGGCATGAA GCCTCATACT AAGGTCTGTC ACGGTGACTT TGTACCTTCT
AATGTTATTC TCGCTGAAGA TGGCGCTCCC GTAATTCTTG ACTGGGCACA CGCAACTCAG
GGCAATGGTG CTGCAGATTG CGCTACAACG TATCTGCATT TGCTTCTTCA TGGTGATGAA
GAGCTTGCCG AGAAATACAT CAATCTTTAT TGCACCAAGC AGGGATGCAC GCGTCAGTAT
GTAAACGAAT GGCTTGGCAT TATCGCTGCA GCAGAGCTTG CACGCGGTCG TGTGAAAGAA
ACAGAATTCC TGCTTAAGTG GGTAAATGTT TTTGATGCAA TGTAA
 
Protein sequence
MELKADKKVI VERNNKVVYD NGDTVVKVFS GSKPSADILN EALNLTRAEQ AGINVPSLVE 
ISKVGNCWAI STRKVEGKTI RQLIEEHPEK EDEYLNKFVN IELAIHAHKA PLLTRQKDKF
TRMINSIPDI LDEATRYELL LKLDGMKPHT KVCHGDFVPS NVILAEDGAP VILDWAHATQ
GNGAADCATT YLHLLLHGDE ELAEKYINLY CTKQGCTRQY VNEWLGIIAA AELARGRVKE
TEFLLKWVNV FDAM