| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0344 |
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| Symbol | |
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| ID | 8413193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 393534 |
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| End bp | 394463 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645021912 |
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| Product | Peptidoglycan-binding domain 1 protein |
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| Protein accession | YP_003179366 |
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| Protein GI | 257784149 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAA TTACTCCTGG TAGCATCGGT GCTGCCGTTG AAGACATTCA AGAACGACTT
GTAAAGCTTG GCTACACCAT TGAAGACGAT GAGCGCCAGA ACCACGTGTT TGACAAATCT
ACTGCTCGTG CGGTTGCCCG CTTTAGGCTT GACCATGATC TTTCTCTTGG TGAAGAAGTA
GATGCCTCTA CCTGGGCAAT CATGGTCGAT GAGGGCTATG AACTTGGCGA TAGAACTCTC
TACTTGCGTC TTCCTAACTT CCATGGCAAT GATGTGCGTC AGCTGCAGGA ACGCCTCAAC
ATCTTGGGTT TCTCGTGCGG AAAAGTTGAC GGTCACTATG GTGTTCACAC CGAAGCTGCC
GTTAAGCTCT TTCAAGAGAG CGTCGGTGAG CTTGCAGACG GTATGGCATT CCAGGACACC
CTCGATGCTA TTGAGCGTCT GCGCCACGTT TGGTCGGGCA AGCAGGCAAA AGGTCCACAT
CCACAGGGCC CTATGGGCTT TGCTCGCGCA GCCAATGTTC TTGAGACCAC CTGCATTGCT
ATTACAGGAG AAGATCCTAT CTCTAGAAAC GTAGCTGCTC GCGTCTATAA CCTTTCTAAG
GCAACTACCG AGGCAAGCGG CATGACCATG ATTGATCGCG CCGATTCCCC CACTGATGCT
GCTACCATTT TGGTACTTAC CACAGACGAT AAGCCAAACA TACCCGCTCG CGGACAAATT
GGCATTGGAT CTGTTTCTAT GGAAGAAAAC GAGACATTGC CCGCAAGACT TCGCACTGCT
ATTGAATCTG CAGATGCAAC AGGAGCTCCT ATTAGGATTG TGCTTCCAGA AGGAACAAAT
GTTGACGGTT CATTTACTAC CGCAGACGCA CAAACTTTAG CAGTTCTTGT TCTTGATGCA
ATTTGTGGAG CATTTGCCTC GCTAAGCTGA
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| Protein sequence | MDPITPGSIG AAVEDIQERL VKLGYTIEDD ERQNHVFDKS TARAVARFRL DHDLSLGEEV
DASTWAIMVD EGYELGDRTL YLRLPNFHGN DVRQLQERLN ILGFSCGKVD GHYGVHTEAA
VKLFQESVGE LADGMAFQDT LDAIERLRHV WSGKQAKGPH PQGPMGFARA ANVLETTCIA
ITGEDPISRN VAARVYNLSK ATTEASGMTM IDRADSPTDA ATILVLTTDD KPNIPARGQI
GIGSVSMEEN ETLPARLRTA IESADATGAP IRIVLPEGTN VDGSFTTADA QTLAVLVLDA
ICGAFASLS
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