Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0295 |
Symbol | |
ID | 8413143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 341190 |
End bp | 342041 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645021862 |
Product | Silent information regulator protein Sir2 |
Protein accession | YP_003179317 |
Protein GI | 257784100 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.216345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA TTGAACAGCT TAAAGATTGG ATTCAGTCGT CAGATAACAT TGTTTTCTTT GGCGGTGCTG GCGTATCAAC AGAAAGTGGT ATTCCAGATT TTAGAGGTAC TAACGGCCTG TATCGACAGG GCGGTATCAA GATAGAGAAT ATGACCATTG GACTGGGGCA AGATGGTTAT GATATGGGAA AAGAAACTTG CGACCTGGGA AATGGAATAA CGGTAGACCC AGACAATGAG GAATCTTTTG CTTATAGTAA GGCACCGGAT TTTACACTTG AAGAGATCTT CTCGCTTGAT GTGTTTCTAG ATTATCCTGC AGCGTATTAT ACGTATTTTA GAAACTCTCA TCATTTAGGA GAGGCTCAAC CAAACATTGC TCATAAGTGG CTGGCAGCCT TGGAAGCAGA GGGAAAGTTG CGCGCGGTGG TGACGCAAAA CATCGACGGA TTGCATCAAG CTGCTGGTAG TAAGCGTGTG TTTGAGCTCC ATGGCAACGA GACACGTTTT TATTGTCCCG AATGCGGTCA TGTCTATACG CTTGATCAGA TTGAAGAGCA GTCGTCTGTG GTGCCGCTCT GTCAATGTGG CGCAGTTATT AGGCCTGATA TTGTCTTTTA CGGAGAAGGC CTCAATATGG ATACCGTTTA TGGGGCTTTA AACGCTATCT CACAAGCGGA AGTCCTTATT GTTGCAGGAA GTTCACTGGT GGTGCAACCT GCCGTCGGTC TTCTCGACTA CTACGAGGGC AACAAGATGG TCATTATCAA CGACCAACCC ACGCCGTACG ACGGCCGAGC CAATCTGGTG ATTAGAGACA GAATAGGTGC CGTCATAGAA CATCTCCTGT AG
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Protein sequence | MTKIEQLKDW IQSSDNIVFF GGAGVSTESG IPDFRGTNGL YRQGGIKIEN MTIGLGQDGY DMGKETCDLG NGITVDPDNE ESFAYSKAPD FTLEEIFSLD VFLDYPAAYY TYFRNSHHLG EAQPNIAHKW LAALEAEGKL RAVVTQNIDG LHQAAGSKRV FELHGNETRF YCPECGHVYT LDQIEEQSSV VPLCQCGAVI RPDIVFYGEG LNMDTVYGAL NAISQAEVLI VAGSSLVVQP AVGLLDYYEG NKMVIINDQP TPYDGRANLV IRDRIGAVIE HLL
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