| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0293 |
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| Symbol | |
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| ID | 8413141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 338589 |
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| End bp | 339836 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645021860 |
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| Product | amidohydrolase |
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| Protein accession | YP_003179315 |
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| Protein GI | 257784098 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.356604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGT ATGCTTTTGT AGGCGGCAAG CTCGTTGACG GTACTGGCTC TGCACCAGTT
GAGGACTCTC TTGTCCTTAT TGATGACGAC AAGATTACCT ATGCTGGTCC TCGTAAAGAG
GTTCCAGAGG GATATGAGGT ACGTGACGCA TCCGGTTATA CCGTAATGCC TGGTCTTGTT
GATACACACC TACACTTCTC CGGTAACCTG ACCGACAACG ATAACGATTG GGTTATTGAG
TCCGTTGCTC AGAAGCAGGC ATGCGCAGTC AAACAGGCTT ATGACGCTCT TACCCACGGT
CTTACCACTG TTGTTGAGAT TGGTCGTAAT GGTATTGCTA TCCGTGACCT CGTTAACATG
GGCATTATGC AGGGTCCTCG TATCTTTGCT ACCGGTCTTG GTCTTTGCCG CGTTGCTGGT
CACGGTGACT CTCATCACCT GCCATTGCAG ATCTCCAAGG ACGGACACCC TTGGGGTGAC
CAGGTAGACG GTCCATGGGA GCTTCGTAAG GCAATTCGTC GTCGTCTTCG TGAAGATCCT
GATGGTATCA AGATTTGGGC AACTGGTGGC GGCATTTGGC GCTGGGACTC TGACCGTTTG
CAGCTCTTCT GCACCGAGGA AATTAAGGCA ATTGCTGACG AGTGCGCACT GGTAGGTATT
CCTCTTTACG CTCACTCTTA TAACAACTTT GACGCTGCGT ATGACTGCGT CCGCTTTGGC
TGCAAGCAGC TCATTCACGG CTTTGAGATT GACGAGCGCA CCATGAAGCT TATGGCTGAG
CAGGGTACCT TCTTTACCCC AACTATCGGC TTCTTGCCAA CTTGGTACGG AACTTATCCA
CCAGACTGGA CTCCAGAGCT TGATGCATTC CCAGGTGAGA CTGTTGTCGA GAAGGGTCTT
GCACGTACCT ATGATAACCT GCGTAAGGCA TATGATATGG GCATTACCAT TACCATTGGT
TCCGACTCCT TCAGTTTTGT TACTCCTTAC GGCTATGTCA CCATCGACGA GATGTATGAC
TTTGTCGAGA AGGTTGGCAT TTCTATTCTT GATACCGTTG CAGCTGCTAC TTACAACGGC
GCAAAGATGC TGGGCAAGGA GAACGAGTTT GGTGCTGTCA AGGAAGGCCT CTCTGCTGAT
ATCCTTGTAG TTAAGGGCGA CGTTGCTAAT AACATCCGCG ACCTCACGCC TGAGAACATG
GACGTCATCA TGAAGGAAGG TAAGATTATC GATCGCGGTA GCTTCTAA
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| Protein sequence | MSKYAFVGGK LVDGTGSAPV EDSLVLIDDD KITYAGPRKE VPEGYEVRDA SGYTVMPGLV
DTHLHFSGNL TDNDNDWVIE SVAQKQACAV KQAYDALTHG LTTVVEIGRN GIAIRDLVNM
GIMQGPRIFA TGLGLCRVAG HGDSHHLPLQ ISKDGHPWGD QVDGPWELRK AIRRRLREDP
DGIKIWATGG GIWRWDSDRL QLFCTEEIKA IADECALVGI PLYAHSYNNF DAAYDCVRFG
CKQLIHGFEI DERTMKLMAE QGTFFTPTIG FLPTWYGTYP PDWTPELDAF PGETVVEKGL
ARTYDNLRKA YDMGITITIG SDSFSFVTPY GYVTIDEMYD FVEKVGISIL DTVAAATYNG
AKMLGKENEF GAVKEGLSAD ILVVKGDVAN NIRDLTPENM DVIMKEGKII DRGSF
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