| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0284 |
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| Symbol | |
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| ID | 8413132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 324867 |
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| End bp | 325862 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645021851 |
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| Product | 2-keto-3-deoxygluconate permease |
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| Protein accession | YP_003179306 |
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| Protein GI | 257784089 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00793] 2-keto-3-deoxygluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000189316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACAA AAGATCCAAT TTCTATTCAG CACCCATTTA AGGCATTGGG TCGTATTCCA
GGTGCAAATA TCCTGATACC ATTGCTGCTT GGTGTTTTCA TGAACACATT TTTCCCAGAG
GTATTTCCAA CGCTTGGTAG CTTTACTGCA GCTATGACCG TCAAGGGTAC TGCTGCTCTG
GTTGGTGCTT TCATGCTGTG TGTTGGTGCA ACCATTTCGT TCAAAAGCGC TCCAAAGGCT
GCACTTCGTG GTGCAATCAT CATCACCTCT AAGGTTGTGT TCTGCGTTGC TCTGGGTCTT
GCTGTTTTGT TCTTCCTGAA CGACAACCTG CTTGGTCTTT CATCTATGGT TATCCTTGCT
GCTTGCTCTG GTGCAAACAA CTCTATGTAT GCAGGTCTGA TGGCTGATTA CGGTAACGAG
TACGAGCAGG GCGCAGTTGC AATTACCACA CTGGTTGTTG GTCCTCCAGT TACTATGCTT
GCTCTTGGCG CAACTGGCCA GTCTCCAATT AACTGGTCTT TGCTTGGTGC AGTTCTTCCA
ATTATCTTAG GTATTTTGCT TGGCAACTTC TTCCCATCTA TGAAGAAGAT GCTGACTAAC
GCTCTGCCAG CAATTATTGT TATGACCTTC TTTGCAATGG GTACTACCAT GAAATTTGAT
TCTCTAATCA TGGCTGGTCC TGCAGGTATT CTGCTTGGCG TTATATGCTC TGTCTGCGGT
GGCTTTATTA ACTACTTTGT TGATCGTGCA ACTGGCGGAT CTGGTATTGC TGGTGTTGCA
ATTTCTTCCT GCGCAGGGGC AAACGCACTT ACACCTGCTG CTATGGCAGA GGCTAATCCA
GCTCTGTACG GTGGAGCTGC TCTTGCTACC GCAAATGCAC AGGTCGCAGC TGCAGTTATC
GTAACTGCAA TCTTGACTCC TTTGATTACT GGTTATGTCG CTGAGCATTT TGCTAAAAAG
GACAACACCT CAGAGGAAGT TGTTGAAGCT GCTTAA
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| Protein sequence | MATKDPISIQ HPFKALGRIP GANILIPLLL GVFMNTFFPE VFPTLGSFTA AMTVKGTAAL
VGAFMLCVGA TISFKSAPKA ALRGAIIITS KVVFCVALGL AVLFFLNDNL LGLSSMVILA
ACSGANNSMY AGLMADYGNE YEQGAVAITT LVVGPPVTML ALGATGQSPI NWSLLGAVLP
IILGILLGNF FPSMKKMLTN ALPAIIVMTF FAMGTTMKFD SLIMAGPAGI LLGVICSVCG
GFINYFVDRA TGGSGIAGVA ISSCAGANAL TPAAMAEANP ALYGGAALAT ANAQVAAAVI
VTAILTPLIT GYVAEHFAKK DNTSEEVVEA A
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