Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0264 |
Symbol | |
ID | 8413112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 303343 |
End bp | 304305 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645021831 |
Product | ApbE family lipoprotein |
Protein accession | YP_003179286 |
Protein GI | 257784069 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.398879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.351019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGAAC TAGCCTACGT TTCCAGATCA ACTCACCTGA TGGGTGCAAC TATCACCATC TCTTTATTAT CACCTCAAAA TGATATGCAG ATGGAATGCT CGGCAGAGCA GTTGCTTAAT GGCGTCTTTG ACCTCCTGCA CATTTATAAC CAGCGATTTA GCGCAAACGA CGCAAATTCC GAGCTCATGC AGGTCAACCA TGCAGCGGGC AAACATTCTA TTCCAGTTCA CCCCGAGTTG TTTGAACTTA TTCAAATTGG AAAAGAACAA AGTCTCCTAC CTGCAAGTCA TTTAAATATT GCCATTGGCC CTTTGGTTCA AGCCTGGCGA ATCGGCTTTA CTGACGCTCG CATTCCAAAC AAAACCGAGA TTGCGCATGC GTTAGCGTTA ACTGACCCAC AACTCATTGA ATTAGATCCG CTGAATTACA CTGTATTTCT TGCCAAAGAA GGCATGAAGC TAGACTTGGG ATGTCTGGCA AAAGGTTACA TTGCCGACAA AATTGCAGAT TATCTGAAAA GTCAACACGT CACTTCCGCG CTTATTAACC TTGGCGGTAA CATTAAAACA ATTGGTACCA ATTTACTTGC AGGCAGACCG TGGCAGATTG GTATCCAGGA TCCGCAACAA CCAAGAGGCA CCAACCTTGC TGTGCTGCCT ATTCGCAACC AGTCCGTAGT GACCTCCGGT ACCTACGAAA GGAAACTTCA GGTAAGCGGA CAGTCTTACC ACCACATTCT TGACCGAGAT ACCGGCTATC CAGTTGACAC GCAACTTGCA AGCATCACGA TTATCTCGGA CAACTCGCTT GACGGAGAAA TTTGGACAAC GCGCCTTTAT GGCGAGAAAC CCAATCAACT TCTTGCCCGC GTAGAACAAG AAAAGGACAT CGATGCACTT ATCGTAACTA ATGATAATCG CGTATATTAT TCGTCGGGAA TCTCACCTGA GCTCCTTGCG TAA
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Protein sequence | MSELAYVSRS THLMGATITI SLLSPQNDMQ MECSAEQLLN GVFDLLHIYN QRFSANDANS ELMQVNHAAG KHSIPVHPEL FELIQIGKEQ SLLPASHLNI AIGPLVQAWR IGFTDARIPN KTEIAHALAL TDPQLIELDP LNYTVFLAKE GMKLDLGCLA KGYIADKIAD YLKSQHVTSA LINLGGNIKT IGTNLLAGRP WQIGIQDPQQ PRGTNLAVLP IRNQSVVTSG TYERKLQVSG QSYHHILDRD TGYPVDTQLA SITIISDNSL DGEIWTTRLY GEKPNQLLAR VEQEKDIDAL IVTNDNRVYY SSGISPELLA
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