Gene Apar_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0259 
Symbol 
ID8413107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp299395 
End bp299883 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content45% 
IMG OID645021826 
ProductMOSC domain containing protein 
Protein accessionYP_003179281 
Protein GI257784064 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.215992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTG GAGTGACTGA ATCTGCTAAA AGAGGCACGG TACTGTCTTG TTGTATTAGC 
GTGAAAAAGG GCACACGAAA AGTACCTGTT GATTCTATTG AAGTGTGCGT AGGAGAAGGT
ATCAAAGGTG ATGCCCATGC TGGAAATTGG CATCGTCAGG TGAGCCTTCT TGGTAACGAG
TCTGTTGATA CTATGCGCGA GAAGGGCGCA GAGTTACATC CAGGAGATTT TGCAGAAAAT
ATACTAACTT CTGGTCTTGC ACTGCGCGAG CTCCCTGTTG GTACGGTACT TGCAATAGGA
GATACTCTTC TTGGGGTAAC TCAGATTGGA AAAGTATGTC ATCACGATTG TGAAATTCGC
AAACTGGTTG GTACTTGCGT AATGCCTACT GATGGTATTT TTACCGTGGT TTTACGTGGA
GGTACTATCA GACCTGGAGA TGCCATTTGT GTAGTTGATG CAAAGGAGCT CTTGCATGAA
ACAGATTAG
 
Protein sequence
MSVGVTESAK RGTVLSCCIS VKKGTRKVPV DSIEVCVGEG IKGDAHAGNW HRQVSLLGNE 
SVDTMREKGA ELHPGDFAEN ILTSGLALRE LPVGTVLAIG DTLLGVTQIG KVCHHDCEIR
KLVGTCVMPT DGIFTVVLRG GTIRPGDAIC VVDAKELLHE TD