Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0235 |
Symbol | |
ID | 8413083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 272177 |
End bp | 272824 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 645021803 |
Product | YheO domain protein |
Protein accession | YP_003179258 |
Protein GI | 257784041 |
COG category | [S] Function unknown |
COG ID | [COG2964] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACATGC AGCAAATTGA CTTTTTAAAA CGTCTTGCAC AGGGTATTGC TCTACAATTT GGCTCAAACT GTGAGGTTGT TGTTCATGAT CTTCAGAGTA AAGATCCCGC TCATACCATA GTTGCTATTG AGAATGGTCA TATAACAGGA AGAAGTATCG GAGATGGCCC TTCAAACGTA GTACTCAAAG CACTCCATTC AAATCCAGAA AAGCTTCATG ACTCTCCCTC TTATCTCACC AAAACAGAAG ACGGCAAGAT ACTCAAATCA ACAACTATTT ACCTACGTGA CGAGAAACAC AAACCAATCG CAATTTTTGC TATTAACTAC GACATTGCAC TTTTCTCTGC AATGGAAGAA TCCTTACGTG GTCTCATTAC TCCCAGTAAT TCATCTGAAG AAACTCCGCA GACCATTCCA CATAACGTAA CCGATCTTCT CGATGAGCTT ATTGATCAAA GCGTACACAT GGTTGGGCGC CCCGTTGCTC TTATGACAAA AGATGACAAA ATCAAAGCAA TCCGTTTTCT TAATGATTCT GGAGCATTTC TTATTACCAA ATCAGGTCAA AAAGTCTGTT CCTATTTTGG CATTTCAAAG TACACTCTTT ATAGCTATCT TGACGAGGCA AAGAATCAAA ATTCATAG
|
Protein sequence | MDMQQIDFLK RLAQGIALQF GSNCEVVVHD LQSKDPAHTI VAIENGHITG RSIGDGPSNV VLKALHSNPE KLHDSPSYLT KTEDGKILKS TTIYLRDEKH KPIAIFAINY DIALFSAMEE SLRGLITPSN SSEETPQTIP HNVTDLLDEL IDQSVHMVGR PVALMTKDDK IKAIRFLNDS GAFLITKSGQ KVCSYFGISK YTLYSYLDEA KNQNS
|
| |