| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0230 |
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| Symbol | |
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| ID | 8413078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 266169 |
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| End bp | 267377 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021798 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003179253 |
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| Protein GI | 257784036 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.78911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTGA TGGATCTACT GCGAGAAACC CTGTCCGCTC TCAATGCTAA CCGCGGCCGC
AGTCTTCTGA CGGTGCTGGG TATTGTTATT GGCATCAGCG CGGTTATTAC TATGACGGCA
TTGATTGACG GCATCAAATA TTCGCTGGTC AGTTCATTGG GTCTCAACCA GTCGCGTATG
GTCATGATCT ACGCGTGGCC AGACCGTGAG GTTACACAAC AAGACCTAGA AATGTTGCAG
CTCAGCGTAC CTGGTTACGA GCTTGTCACT GGCATTGACT CTACAATGGC CCACATCAGC
TCAGCTGAGA AGCAGTTTGA CGCGCGAATC ATCGGTTGCA CGCCTGATTA CTTTACTGCC
ATGGGCCTCA AGGCATCCGT GGGTTCACTT TTCACAAAGT CCGACGTAGA TGACAAATCA
AGAAACGTTC TTCTCGACAA AAAGTCTGCC GAGAAACTCT TTGGTAGTGC AGATGCATCT
ATTGGACAGG TTGTTCGTAT TGATAACGAC AGCTACACCA TCGTTGGTGT GACAAACGGT
GGTCCAAATG CTGGTGGTCA AGGAGAAACG CTGCTGGCTT ATATGCCGTA CTCCACGTAT
TCCGTGCGTC TTACGGGTAC CAAAACTATT AGTCAGATCT TTGGGTACGC TCGCGAAAAT
GTTGACATGA AGGCACTTGC GGATAAAACA AAGTCCTGGT TACTGGATTG GTTTAACATT
CCTTCTGCGC AAGCTGAAGA TCGCGTGACG GTTATGACGC TCTCGTCCAT CATTGAACAG
ATGAACGCCA CGTTGATGTC GTTCCAGATT TTGGTTACCG CTACGGCAAG CATCTCGCTT
TTGGTTGGCG GTATTGGCAT TATGAACATG ATGCTTACCA ACGTGACAGA ACGCATTAGG
GAGATTGGCC TGCGTAAAGC CTTGGGAGCT CGCGCGTCCG ATATCACCAA GCAGTTCCTG
TGCGAGTCTA TCTTGATTTG CATTATGGGT GGTGTGATTG GTATTGCCTT GGGTTACGCC
GGAGCATGGG GATTGGCTGG CTCATTTAGC AGGATGATAA CGATTGATAC GGGTATCACG
CCCATTATTA CCCCAACCAT CGTGATGGTT ACCTCGGGGA TTTGCATTGG CATTGGATTG
ATTTTTGGCT ACTGGCCTGC TCGTCGTGCC TCAAAGCTCA ATCCTGTGGA GTCGCTCCGA
TATCAATAG
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| Protein sequence | MRLMDLLRET LSALNANRGR SLLTVLGIVI GISAVITMTA LIDGIKYSLV SSLGLNQSRM
VMIYAWPDRE VTQQDLEMLQ LSVPGYELVT GIDSTMAHIS SAEKQFDARI IGCTPDYFTA
MGLKASVGSL FTKSDVDDKS RNVLLDKKSA EKLFGSADAS IGQVVRIDND SYTIVGVTNG
GPNAGGQGET LLAYMPYSTY SVRLTGTKTI SQIFGYAREN VDMKALADKT KSWLLDWFNI
PSAQAEDRVT VMTLSSIIEQ MNATLMSFQI LVTATASISL LVGGIGIMNM MLTNVTERIR
EIGLRKALGA RASDITKQFL CESILICIMG GVIGIALGYA GAWGLAGSFS RMITIDTGIT
PIITPTIVMV TSGICIGIGL IFGYWPARRA SKLNPVESLR YQ
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