| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0229 |
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| Symbol | |
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| ID | 8413077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 265378 |
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| End bp | 266172 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645021797 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179252 |
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| Protein GI | 257784035 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.772392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAG TAATTGAGGT ACATAAGCTG CATCGCATTT ATGAGACAGC TGCGGGTTTG
ACGCACGCTC TACGAGGTGT TTCACTAACT GTGGAGAAGG GTGAGTTTCT CTGCATTATG
GGTCCGTCTG GCTCGGGTAA ATCAACCCTG ATGAACATCT TAGGCTGCCT AGATACACCT
ACTGCTGGTT CGTACAAGTT AGAAGGACTT GAAGTTGCGG ATCTTTCTGA TGATGATCTA
GCAGAGATTC GTGCCACGCG TCTGGGCTTT GTTTTCCAGT CGTTTAACTT ACTGCCGCGT
ACTACGGTGC TGCGAAACGT TACGTTGCCG CTCATCTACT CAGACATTCC TGCAAAAGAA
CGAGAGCTGC GTGCTTGGAA GGCACTACGC TCCGTTGGTC TGCCCGAGGA ATACTACGAG
CATAAGTCTA ATGAGCTTTC CGGTGGTCAG GTGCAGCGTG TTGCAATTGC TCGTGCGCTT
GTTAACGACC CGGCGGTTAT TTTTGCTGAT GAACCAACGG GTAATCTTGA TTCCGCGACA
AGTGAGATGG TTCTTAACAC GTTTAAATCT ATGCAGGAGC GTGGCAAGAC AATCGTGCTA
ATTACCCACG ACCCTGAGAC TGCTCTGTGG GCTGATCGAG TAGTGCATAT TCGTGACGGT
CGCTTGCTTA CTGACGAGCA GGAAAAAGAG TTTGTGAAGC ATCACACTGC ACAGACTTCA
ACGGACGTGC AAGCCGCAAC GGGTGTGCAG ACTGCAGTAG ACGTACAGAC CGCGACAGGA
GGTGCCACGC TATGA
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| Protein sequence | MSKVIEVHKL HRIYETAAGL THALRGVSLT VEKGEFLCIM GPSGSGKSTL MNILGCLDTP
TAGSYKLEGL EVADLSDDDL AEIRATRLGF VFQSFNLLPR TTVLRNVTLP LIYSDIPAKE
RELRAWKALR SVGLPEEYYE HKSNELSGGQ VQRVAIARAL VNDPAVIFAD EPTGNLDSAT
SEMVLNTFKS MQERGKTIVL ITHDPETALW ADRVVHIRDG RLLTDEQEKE FVKHHTAQTS
TDVQAATGVQ TAVDVQTATG GATL
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