Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0217 |
Symbol | |
ID | 8413065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 256092 |
End bp | 257024 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645021785 |
Product | ABC transporter related |
Protein accession | YP_003179240 |
Protein GI | 257784023 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.701871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGACA TAAAGAAAGG CTCCCCCGCC CTGCAACTCA GCGCGGTGCA AAAGAGCTAT GGAGACCACC ATGTACTTTG TGGTGTAGAC CTCAAAGTTA TGCCTGGTCA AATACTTGGT CTTCTCGGCA AAAACGGAGC TGGAAAATCA ACCTTAATTG AAATACTCTG CGGACTTAGA CAAGCAGATT CAGGATCTAT CTCCGTCTGT GGAATGAATC CTGCAAAAGA ATCGGTAGGC CATCTTATTG GATACGCTCC ACAAGACCTT GGAATCTACC CTGACCTTAC CGTCATGGAG AACCTTACAT ATTACGGACA GCTCGAGGGA CTTTCTCGCA AGCGCTCATT TGCACGAGCA GAAGAAGTAA TGGAGCTGTT AGGACTTACA AGCGAAAAAA CCAAGCGAGC CCGTCATCTA TCCGGTGGAC AAAAAAGAAG GCTACACTCA GGTATGGCCA TCATGCACGA GCCCAAGGTT ATCTTTATGG ATGAGCCAAC GGTAGGAGCT GATGTTGAAG CGCGCAGCCG CATTTTGCAT ACCATGCAAT CACTTGCCAA AAATGGTGCA ACAATCATTT ACACCTCTCA CTACCTAGCA GAATTTGAAG AACTTGGTGC TGATATTGCA ATCATACATA ACGGTCGCAT TGCAGCAGAA GGTTCACTTG AAAAGATTAT TACCAACTAC GCACGCAGCT CGGTCAGTCT GCAATTCTCA CAACCTGTTC CTTCTATTGA CGGTTGGCAA AGCAGCGGCG TGAAACTTTT GCGAGAAAAC AATGCAAACG ATGCAGGAAG CGCCATTGCT GATCTTCTCG CCAATCCTGC TCTAAGAGAA AACACCCTAG AAAACGTACA CATATCACAG GCAAGCCTTC AAAGCGCATA TTTATCGATT GTTGGAGAGG AGACAAATCA TGACAACGCT TAA
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Protein sequence | MSDIKKGSPA LQLSAVQKSY GDHHVLCGVD LKVMPGQILG LLGKNGAGKS TLIEILCGLR QADSGSISVC GMNPAKESVG HLIGYAPQDL GIYPDLTVME NLTYYGQLEG LSRKRSFARA EEVMELLGLT SEKTKRARHL SGGQKRRLHS GMAIMHEPKV IFMDEPTVGA DVEARSRILH TMQSLAKNGA TIIYTSHYLA EFEELGADIA IIHNGRIAAE GSLEKIITNY ARSSVSLQFS QPVPSIDGWQ SSGVKLLREN NANDAGSAIA DLLANPALRE NTLENVHISQ ASLQSAYLSI VGEETNHDNA
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