| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0208 |
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| Symbol | |
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| ID | 8413056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 246638 |
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| End bp | 248467 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645021776 |
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| Product | glucosamine/fructose-6-phosphate aminotransferase, isomerizing |
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| Protein accession | YP_003179231 |
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| Protein GI | 257784014 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0172875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGCA TCGTTGGTTT CACCGGACAC CAAAGTGCAA AAGATATTCT TATTGAAGGT
CTTAAACGTC TCGAATATCG TGGGTATGAC TCTGTCGGCA TCGCTTTGCA AAACGCTACC
AATAAAGAAC TTACGGTCGT ACATCGCGTA GGAAAAGTTG CGGGATTAGC TGAAGCGGTG
GAGTACCTCG ATAACGTAAG TCCCTGTGGC ATTGGACATA CCCGCTGGGC AACGCATGGT
GCTCCAAGCG AGCGTAATGC TCACCCACAT ACCTCTTGCG ATAATAAAAT TGCTGTCGTA
CATAATGGCA TCATCGAGAA TTTTGCCGAA CTCCGTGAGC AACTTGAAGC TCATGGGCAC
AAATTCCGCA GCGACACCGA TACTGAAGTT GTCGCTCACC TTATTGAAGA AGCCTACAGC
GGCAACCTTC GCGATGCTGT TGCCAAGGCA TGCTCGCAGA TAGTAGGAAC CTATGGACTT
GCTGTTATAT GCTCTCAGGA ACCTGGTCGC ATCGTAGTTA CTCGTAAAGA TTCCCCCATC
GTCCTTGCAC ATGGCGAGAA GGGCAGCTAC GTTGCATCCG ACATCATCGC GGTTATCGAA
GCCTCCCGAG ACGTTACTGT CCTTGGCGAC AACGAGTTTG CCGTTATGGA GCCCGATGGC
ATCAGCTACA CCGATGCTGA AGGCAATCCT ATTCAACCTA AAGTTATGCA CGTCGATTGG
GATGTTGACG TTGCCGAGAA GGGCGGCTAC CCCGATTTCA TGCTCAAAGA AATCCATGAG
CAGCCACGTG TTATCCGCGA CACCCTTGCA GGACGTCTGA CCAACGGCGT ACTTTCCATT
GATGAGCTAG GTATGTCCTT GGAGCAGCTC CGTTTAATTG ATCGCGTTTA TATCATTGCT
TGTGGAACCA GCTACCACGC CGGTCTTATC GCCCGTCAGC TTATCGAAGG CTGGGCACGC
ATACCTGTCG AAGTTGAAGC TGCAAGCGAA TTTCGTTATC GCAACCCCAT TATTACTCCG
TCAACGCTGG TAGTTGCCGT TTCTCAGTCC GGTGAAACTG CTGACACTCT CGCAGCCATC
CGCGATGCCC GCATCAAAGG GGCCAAGGTT TTTGGCATTA CCAACGTTAT TGGTAGTCCC
GTGGCCCGTG AATCCGATGG TGTTATTTAT ACTAAGGCTA ACAAGGAGAT TGCCGTTGCC
TCAACCAAAT CTTTCCTCGG CCAGATTGTG AGCCTGACGC TTCTTGCCAT GGTTCTTGCG
CAGGCAAAAG GAAAGCTCTC AATCGCTCAG ATACGCCTGC TCTTTAAGGA ACTTGCCGAT
ACCGCCGAGC AGGTCGAGGA GGTCCTCAGC GATACAAAGG CTATCGACAT CGCAGCGCAG
GCCTGCAAAG ATGCTAATGA TGCCTTGTTC ATTGGCCGCG GCATGGGGGC TGCCATCTGC
TACGAAGGCG CCCTCAAACT CAAGGAAATT AGTTATCTTC ATGCCGAGGC ATACGCGGCC
GGAGAGATGA AGCATGGCCC CATTGCACTT CTGTCCAAAG GCTATCCTGT CATTGCCGTA
GCAACTAACT CCCCGGTATA CGACAAGATG ATCTCCAATA TCCAGGAATC CCGAGCACGC
GGCGCCATGA TTATTGCCGT AGCAACCGAA GGTGATCAGG AAATCAAAAA GCATGCCGAC
TATGTCATCT ACGTGCCTAA AGTCAGAGAT GCCTTCTCAC CAATCATTGC CTCGGTACCT
CTCCAGCTTT TTGCGCGCTC CATGGCTCTT GCACGCGGCT GTGACGTTGA TAAGCCAAGA
AACCTTGCAA AGTCAGTAAC GGTCGAATAA
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| Protein sequence | MCGIVGFTGH QSAKDILIEG LKRLEYRGYD SVGIALQNAT NKELTVVHRV GKVAGLAEAV
EYLDNVSPCG IGHTRWATHG APSERNAHPH TSCDNKIAVV HNGIIENFAE LREQLEAHGH
KFRSDTDTEV VAHLIEEAYS GNLRDAVAKA CSQIVGTYGL AVICSQEPGR IVVTRKDSPI
VLAHGEKGSY VASDIIAVIE ASRDVTVLGD NEFAVMEPDG ISYTDAEGNP IQPKVMHVDW
DVDVAEKGGY PDFMLKEIHE QPRVIRDTLA GRLTNGVLSI DELGMSLEQL RLIDRVYIIA
CGTSYHAGLI ARQLIEGWAR IPVEVEAASE FRYRNPIITP STLVVAVSQS GETADTLAAI
RDARIKGAKV FGITNVIGSP VARESDGVIY TKANKEIAVA STKSFLGQIV SLTLLAMVLA
QAKGKLSIAQ IRLLFKELAD TAEQVEEVLS DTKAIDIAAQ ACKDANDALF IGRGMGAAIC
YEGALKLKEI SYLHAEAYAA GEMKHGPIAL LSKGYPVIAV ATNSPVYDKM ISNIQESRAR
GAMIIAVATE GDQEIKKHAD YVIYVPKVRD AFSPIIASVP LQLFARSMAL ARGCDVDKPR
NLAKSVTVE
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