| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0193 |
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| Symbol | |
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| ID | 8413041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 227354 |
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| End bp | 230041 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 645021763 |
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| Product | SMC domain protein |
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| Protein accession | YP_003179218 |
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| Protein GI | 257784001 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.711323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0164189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATAG CTAAATGGTA TAAAATTGAT TTTCATACGC ATACTCCAGA GAGTAGGTGT
TTCCCAGATA AATCTATTAC GGCAGCAAGA TGGTTACAGG CTGCTAAAGA TAGCGGATTG
AATGCTGTAG TTGTAACTGA TCATAATTCA GTTGGATTTA TTAGTGAAAT AGAAAAAGTC
AAAAATCAAT TTGAGGAGCT TAATCCTATT AAGGGTAATC TCTTTAAAGT TTTCTATGGT
ATAGAATTAT GTGTTTCAGC TGAGTTCACA CATATACTTA TAATTTTTGA TGACAAAATG
TCAGTGACTG AAATTGAAGA TGCAGTCATT GGTTGTTTGG GATTAAAAAG AAATGATTGG
GCAAATACGG AGATAAATGT TTCTGAGGAT AAATTAAAAA AGTTATGCCA AGAATACGAA
AATAAAGTGT TTGTTATACC TGCTCATTTT GCATCAAATA AAGGCTTAGG AACATGTAGA
ACAAATGCAA TAAAAAAATA TCAAGAGTTT GTTAAGTTTT CAGCCGTAGA GGTTAGAAAT
TCTACAGATG TTAAAGAATA TAAAAACAAA CTAAATAATA AAGTGATTAA TGAAGCTGTT
TTAGTAACTG GATCCGACAA TCCGTCAAAT AAAGACGAGA CTCAACATTC TATTGAAGGG
TTTGGAAAGA TATTTACGTG GATTAAAGTT TCAGATTTAT CATTCAATGC ATTAAGACAA
GTTTTTATTG GTCCTGAACA TAGATGTATA AATTGGTTGG ATTTAGAAGC AATTGGCATA
GATTATAATC CAAACAATAT ATCATTTAAT TATATATCAG GGATAAACTT TAAGGGCATA
TCACATATGA CTGATATGAA TATAAGATTT TCACCACATC TAAATTGCAT TGTTGGTGGA
AGGGGAACTG GAAAATCAAC ACTTGTAGAA GCTATTAATT ATGGCGTAGG TAATGAGTCT
GATTTAAAAA GATGTAATTT AATGGAAAAA ACTTTTGATA AAAGCGGGTC AATTAGTACT
TTCTTTAATT TTGGGGAAGT AAAAGCATAC AAGGCAAATT GTATTAGGAG TGGAAAGCAA
ACTGTTTTAA CAATAGAAGA TGATAATGGT GTTGTAGATA ATCCACCAGA ATTTAAAATA
GACTTCTATG GTCAAAAGGA AATATTTGGA TTAATAGAGG ATGATAATGA TATAAGTAGC
AGTGATATAA GCCCATTGAT AAAATTGATA GATGATAAAG TGAAAGCGGA GTTGTTTTCA
TATAAAGATG ATATTGAAAA TTCTATATCG AGCATGGTAT CCTTATCAAA TAATTACAAA
GCTAATCGCA AAAAAATCCA AGATATGCCT GGAATAAAAG CCGAAATAGA AAAGAGTGAG
GCTATTCTAA AAAAATTCCA AGCTAGTGGT ATTGAAAGTG CTCGTGCAGA ATATGAACAA
ACTGATAATG TTATTAAAAC AATTAATGAG AAAGTTCAAA CTGAAAAAGA GGTTATTAAC
GAATCTATTC AAAGATTTTC AGAACTAAAG GAAGATTTAA ACAGAGATAT TTTAGTTTTG
TTGGAAAAGT TAGGTAGCGA TGATGAGAAT ATCCAAATAG TTACAGAATT AAAAGATATA
AACGATGAAA TTATAAATCA TGCTAATAAT AAGATAGATT CTTTAAGCAA ATTAGAAGAA
AAATTTAATT CTTCAAATAT TTACAATAAA TTAAAAGTTG ATTATGAAAA GTATAAAGAA
GCGGTGGAAG AGGTTAATAA TACCGGTGGG GAGAACATTG ATTATATACA AAATCAATTG
CAAAATAATA GAAACCGCTA TGATCAATTA AATCAATTGC AGCAACAACA ACGGATTCTT
AAAGAGAAAA TTAGGCAATC TATATGTGAT TTTGTGGAAA AAAGGATTAA ATTGTCTGAC
AAAAGAAAAC ATGTAATCCT TGAGTTAGGA CTTGATACTA TAAAAATTGA GATTGTTCCT
TTGGGGCATA TTTCAAGATG GAAAGCAAAT TTACAAAAGG AATTTGGTAA AGAAGGAATA
TTTGATTCTG AGTTTGAAAA ACTATCAGAA AATGTTTTAT CAAAAACTAA TAATTTTGAA
AACTATAAAA AATTCCTTGA GTTTTTATTA ATTGATGATA CTGGAGATAT AGAGTGTCTT
TATGAAGATA TAAAAACCGA TCCAAGGTTT AATAAACTAT GGTTAGATAA GCATAAGAAC
GATACATTAA GTTCAATGGT AAAAATAATT CCTGAAGATA AAGTGAATAT AAAAATTTTA
GAGGATTCTG GTGAAATTGA TATAAATGAT GGCTCTCCAG GTCAAAAGAG TGCAGCGCTA
CTTGCTTTTA TTCTTAATAG TGGAGATAGC CCGTTAGTGA TAGATCAACC AGAGGATGAT
TTAGATAACA GTTTAATATA TAGTTTAGTT GTTACATCCA TTAGGCGAAT GAAAAAGAAA
CGTCAAATAA TTATAGTAAC TCATAATCCC AATATACCGG TATTAGGAGA TGCAGAAGGA
ATATTGATTT TAGATAGAGA TTCCTTTGGC AAAGTTACAT TTAGAAAAGA TAAGAAGGCG
GGCTGTATAG AAGAACAAGT AATAAAAGAA GGAATTTGTG AAATAATGGA AGGTGGAGAA
GCAGCTTTTA AAAAAAGAGA AGAAAAATAT CTAAGCCTTC TGGGTTGA
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| Protein sequence | MAIAKWYKID FHTHTPESRC FPDKSITAAR WLQAAKDSGL NAVVVTDHNS VGFISEIEKV
KNQFEELNPI KGNLFKVFYG IELCVSAEFT HILIIFDDKM SVTEIEDAVI GCLGLKRNDW
ANTEINVSED KLKKLCQEYE NKVFVIPAHF ASNKGLGTCR TNAIKKYQEF VKFSAVEVRN
STDVKEYKNK LNNKVINEAV LVTGSDNPSN KDETQHSIEG FGKIFTWIKV SDLSFNALRQ
VFIGPEHRCI NWLDLEAIGI DYNPNNISFN YISGINFKGI SHMTDMNIRF SPHLNCIVGG
RGTGKSTLVE AINYGVGNES DLKRCNLMEK TFDKSGSIST FFNFGEVKAY KANCIRSGKQ
TVLTIEDDNG VVDNPPEFKI DFYGQKEIFG LIEDDNDISS SDISPLIKLI DDKVKAELFS
YKDDIENSIS SMVSLSNNYK ANRKKIQDMP GIKAEIEKSE AILKKFQASG IESARAEYEQ
TDNVIKTINE KVQTEKEVIN ESIQRFSELK EDLNRDILVL LEKLGSDDEN IQIVTELKDI
NDEIINHANN KIDSLSKLEE KFNSSNIYNK LKVDYEKYKE AVEEVNNTGG ENIDYIQNQL
QNNRNRYDQL NQLQQQQRIL KEKIRQSICD FVEKRIKLSD KRKHVILELG LDTIKIEIVP
LGHISRWKAN LQKEFGKEGI FDSEFEKLSE NVLSKTNNFE NYKKFLEFLL IDDTGDIECL
YEDIKTDPRF NKLWLDKHKN DTLSSMVKII PEDKVNIKIL EDSGEIDIND GSPGQKSAAL
LAFILNSGDS PLVIDQPEDD LDNSLIYSLV VTSIRRMKKK RQIIIVTHNP NIPVLGDAEG
ILILDRDSFG KVTFRKDKKA GCIEEQVIKE GICEIMEGGE AAFKKREEKY LSLLG
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